| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3188 |
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| Symbol | |
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| ID | 3910989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3645198 |
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| End bp | 3646127 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885090 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_486795 |
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| Protein GI | 86750299 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCAT ACCAAGCAAC TAAGCGAACC GCGCTGATCA CCGGAGCCAA TTCGGGCCTC
GGCAAAGCCG TCGCAACGGC ACTCGCGGCC GAGGATGCGC GCGTCGGTCT GGTCGCGCGC
GACCGCGAAC GCGGCGAGAC GGCGCTCGCG GACATCCGGG CCGCCACCGG AAACAACGAC
CTGCATCTGT TCGTCGCCGA TCTGGCCGAT CAGTCGGCGA TCCGCGCGCT GGCGCAGGCG
GTGCATCGGC GTTTCGACCG CCTGCATCTG CTGATCAACA ATGCCGGCAC CGCTTTCCCC
GCGCGGCGGC TCAGCCCGGA CGGGATCGAA TGCGCCTTCG CCGTGAACCA CCTCGGCCCG
TTCCTCCTCA CCAATCTGCT GCTGGATCTG CTCCGCGCCA GCGCGCCGGC GCGGATCGTC
AATGTCGGCA CCCGCATCAG CACCGCGCTG GATTTCGAGG ACCTGAATTG GGAGCGGCGG
CCGTATCGCA TGATGCAGGG CTACGGCCAG TCCAAGCTCG GCAATCTGCA CTTCACCTTC
GAACTGGCGC GCCGTCTGCA AGGCAGCGGC GTCACCGTCA ATTGCGTGTT CCCGGGCGTG
TTCAAATCCA ATCTCGGCGG CACCGACGGC GCCCAGGGCG CCTTGCTGAA GCTGTTCGCG
CGCTGGGGCG GCTGGGCGAT CCCGTCGCCG GAGCGGGCGG CGCGCCGCGT GCTGTATCTC
GCCAACGCAC CGGAACTGGC CACGGTGAGC GGCCAGTATT TCGGCGACCG CAAGATCATC
CCGGCGCCGG CCCAGGCGCT CGATGTCGAA GCCAATCGCC GGCTGTGGCA GATCAGCGAA
GCGCTGACGG CCCCGGGACC GGAACCCGCC CCGCGCGAGC GCCCCTCCAC CGGCCCCGCC
CACGATCGAC CGATCACCAC CGATCGATGA
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| Protein sequence | MHPYQATKRT ALITGANSGL GKAVATALAA EDARVGLVAR DRERGETALA DIRAATGNND
LHLFVADLAD QSAIRALAQA VHRRFDRLHL LINNAGTAFP ARRLSPDGIE CAFAVNHLGP
FLLTNLLLDL LRASAPARIV NVGTRISTAL DFEDLNWERR PYRMMQGYGQ SKLGNLHFTF
ELARRLQGSG VTVNCVFPGV FKSNLGGTDG AQGALLKLFA RWGGWAIPSP ERAARRVLYL
ANAPELATVS GQYFGDRKII PAPAQALDVE ANRRLWQISE ALTAPGPEPA PRERPSTGPA
HDRPITTDR
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