Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0668 |
Symbol | |
ID | 5705004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 747754 |
End bp | 748620 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641270188 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001535581 |
Protein GI | 159036328 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.512596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAAGATC TCACTGAGCG CCGGGTTGTG GTGGTAACCG GGGCCAGCTC CGGCATCGGC CTCGCAGCCG CCATTGACCT GGCCTACCGC GGCGACCAGG TGGTACTCGT CGGACGCGAT TCGGCCCGGC TCCAGTCCGC CGCTGGACAG GTCCGCGAGG CGACCGGGGA GCGGCCGGAG CTGTTTCGCG CGGATTTCGC CGTCCTCGAT GACGTCCGAT CCCTGGCGGA GCGGCTGCGC ACCGCCTACG ACCGGATCGG CGTGCTCGCC AACAACGCGG GAACAATCGC ACTCCACCCG ACAACCACTG TGGATGGTTA CGAACTGTCG GTCCAAGCCA ACCACCTCGC GCCGTTCCTG TTGACCAACC TCCTGCGGGA CCGGCTCGGC CGGGTCGTCG TGACCGCGTC CGCCGCCCAC CGCAGCGGGC TGCTCAACCC CAACGATCTC AACCAGACAC TGCACCGCTT CCGCCCGATG AGCGCATACA GCGCCAGCAA ACGGGCGAAC ATCCTGTTCA CCGTCGAAGC AGCTCGGCGC TGGCCGGACC TACCGACATA CTGTTTTCAC CCGGGCATCG TTCGGACCCG GTTCGCCAGC GACAGCCGGC TGATAACGTT CGCCATGCGC CTGTTGCCGG CCCGCAGCCC CGCGAAGGGG GCCGAAACTT TGGTCTGGCT CGCCAACCAG GCTCCGGAAC GGCTACGCAG TGGCGGCTAT TACCAGGACC GACGGCTCCG CCACCCGCAT GCGACGGCAA CCGACCCGCA GCTGGCCGCT CAGCTCTGGA CAGCCAGCGC GAAGGCCGTC GGTATCGACA GCAGTCACGG GCCCGACCTG CCGTCAGATG TCCTTGACGG GGACTGA
|
Protein sequence | MEDLTERRVV VVTGASSGIG LAAAIDLAYR GDQVVLVGRD SARLQSAAGQ VREATGERPE LFRADFAVLD DVRSLAERLR TAYDRIGVLA NNAGTIALHP TTTVDGYELS VQANHLAPFL LTNLLRDRLG RVVVTASAAH RSGLLNPNDL NQTLHRFRPM SAYSASKRAN ILFTVEAARR WPDLPTYCFH PGIVRTRFAS DSRLITFAMR LLPARSPAKG AETLVWLANQ APERLRSGGY YQDRRLRHPH ATATDPQLAA QLWTASAKAV GIDSSHGPDL PSDVLDGD
|
| |