| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1638 |
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| Symbol | |
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| ID | 7974706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1770849 |
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| End bp | 1771736 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644792238 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002943555 |
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| Protein GI | 239814645 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAC GCCCCACCAT TGTCGTGACC GGTGCGACCA GCGGAATCGG AGAGATCGCG
AGCATCGAGC TGGCAAAGCG CGGGGCGCAT CTGGTACTCA CGGCGCGGGA CAAGGCGAAG
GCCAGCCGTA CGCTCGGCCG CATACGGGCC GAGGCACCCG GTGCGCATGT CGACTTTCAC
TACGCCGACT TTGGCAGTGT GCACGCCGTT GCGGCAGTGG CCACCGAGAT CGCCGCCCGG
TACGACCGCA TCGACGTACT GATCAACAAT GCCGGGCTGC ACGCCTTCGA GCAACGGGTC
ACCGGCGATG GCTTTGCCGA AATGATTGCG GTGAACTATC TGGCGCCCTG GTTGTTCACG
GACATCTTGC GAGATGCGCT GATCCGCTCG GCCCCGTCCA GGGTCGTGAC GGTCGCATCC
GAGGCATCTC GGCGAAGCGG CGGCTTGACG CCCGACAAGG ATCTTGTGGA TACGAGCCCG
TTCACACGCG CGGGCTCATC CAAGGTGTAT GGCAAAACCA AGCTCATGGA CATCATGTTC
TCGCTGGAAC TCGCCTGCCA GCTCGAAGGC ACCGGCGTCA CCGCCCACTG CCTGGACCCG
GGGTTCAATG TGACGGGCCT GGGCCGCGAG CTTGGCTTTG CGGAGCCCCT TGCCAAGGTT
CTGAAGTGGC TGAGCGTGGG AGATCCTCGA AGAGGGGCGG AGATCATCGT GAGGCTCGCC
ACCGAAGACA CTGCCCCCAT GACCGGCGGC TACTTCTCGG TGAAGAATGC ACGGCCGCTG
AATCCATCCG CACCAGCCGA TGATGCGGCC GCACGGCACG AGCTTTGGAT CAGGACACGG
TCGCTACTTT CGGAGCGCCT CGAAACTATT GGCTTCAAAC AGCTATAG
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| Protein sequence | MKERPTIVVT GATSGIGEIA SIELAKRGAH LVLTARDKAK ASRTLGRIRA EAPGAHVDFH
YADFGSVHAV AAVATEIAAR YDRIDVLINN AGLHAFEQRV TGDGFAEMIA VNYLAPWLFT
DILRDALIRS APSRVVTVAS EASRRSGGLT PDKDLVDTSP FTRAGSSKVY GKTKLMDIMF
SLELACQLEG TGVTAHCLDP GFNVTGLGRE LGFAEPLAKV LKWLSVGDPR RGAEIIVRLA
TEDTAPMTGG YFSVKNARPL NPSAPADDAA ARHELWIRTR SLLSERLETI GFKQL
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