Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_1940 |
Symbol | |
ID | 4973264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 2018043 |
End bp | 2018909 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640456149 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001133208 |
Protein GI | 145222530 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.944669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACT GGACCGCAGC CGACCTGCCC TCATTTGCCG GACGCACGGT GATCGTGACC GGAGCGAACA GCGGACTGGG CCTGGTGACC GCCCGTGAAC TCGCCCGCGT CGGCGCCACC ACCATCCTGG CGGTCCGCAA TCTCGACAAG GGTCGCGCCG CGGCCGACTC CATGTCCGGT GACGTCGAGG TCCGCCGGCT CGACCTGCAG GACCTGTCGT CGGTGCGCGA GTTCGCCGAC GGCGTCGACT CCGTGGACGT GCTGGTCAAC AACGCCGGCA TCATGGCCGT CCCGTATGCG CTGACCGCAG ACGGGTTCGA GAGCCAGATC GGCACCAACC ACCTCGGGCA TTTCGCGCTG ACCAACCTGC TGCTGCCGAA GATCAGCGAC CGGGTCGTCA CGGTGTCCTC GATGATGCAT CTGTTCGGCC GCATCAACCT CAACGACCTG AACTGGAAGT CACGGCCGTA TCTGGCCTGG CCCGCGTACG GGCAGTCGAA GCTGGCCAAC CTGCTGTTCA CCAGCGAACT GCAGCGACGG CTGAGCCGGG CGGGGTCCCC GGTCCGCGCG GTGGCCGCAC ATCCGGGCTA CTCGGCGACC AACCTGCAGG GACACTCCGG CAACCCGCTC GGCGAGAAGA TCGCGCGGGC CGGCAACCGG ATGGCCACCG ACGCCGACTT CGGCGCCCGG CAGACGCTCT ACGCGGTGGC CCGGGACGTC GCCGGGGACA GCTTCATCGG ACCACGCTTC ACGATGTTCG GCCCCACCGT CACGACGTGG CGCAGCCCGC TGGCCCGAAA CCGGACCACC GCGGCCCAGC TGTGGACACT GTCTGAGCAG CTCACAGGCG TCGAGTTCCC GCTCTGA
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Protein sequence | MSDWTAADLP SFAGRTVIVT GANSGLGLVT ARELARVGAT TILAVRNLDK GRAAADSMSG DVEVRRLDLQ DLSSVREFAD GVDSVDVLVN NAGIMAVPYA LTADGFESQI GTNHLGHFAL TNLLLPKISD RVVTVSSMMH LFGRINLNDL NWKSRPYLAW PAYGQSKLAN LLFTSELQRR LSRAGSPVRA VAAHPGYSAT NLQGHSGNPL GEKIARAGNR MATDADFGAR QTLYAVARDV AGDSFIGPRF TMFGPTVTTW RSPLARNRTT AAQLWTLSEQ LTGVEFPL
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