Gene Mmcs_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_0605 
Symbol 
ID4109451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp667581 
End bp668483 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content70% 
IMG OID638029731 
Productshort chain dehydrogenase 
Protein accessionYP_637782 
Protein GI108797585 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.140006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGAAAT GGACCACCGC CGACATCCCG AGCCAGTCCG GCCGCACCGC GGTCGTCACC 
GGCGCCAACA CCGGGCTCGG CCTCGAAACC GCCAAAGCGC TGGCCGCACG CGGCGCACAC
GTCGTGCTCG CGGTCCGCGA CACCGAGAAG GGCAAACGCG CCGCCGACGA GATCACCGCC
GCCCATCCCG AGGCCGCGGT GGGCGTGCAG AGCCTCGACC TCGGGTCGCT GCGCTCGGTG
CGCACCGCGG CCGAGGCGCT CAAGGCCGAC TTCCCGCGCA TCGACCTGCT GATCAACAAC
GCCGGGGTGA TGTACCCGCC CAAGCAGACC ACCGAGGACG GTTTCGAGCT CACGTTCGGC
ACCAACCACC TCGGCCACTT CGCCCTCACC GGACTGCTGC TGGAGAACGT CCTGGCGGCG
CCGAACTCGC GGGTGGTGAC CGTCAGCAGC CAGGGGCACC GCATCCGGGC CGCGATCCAC
TTCGACGATC TGCAATGGGA GCGCAGCTAC AGCCGCGTCG GCGCCTACGG ACAGTCGAAG
CTGTCGAATC TGCTGTTCAC CTACGAACTC CAGCGCCGCC TCGACACCCG CGACGCCATC
GCGGTCGCCG CCCACCCCGG GGTGTCCAAC ACCGAACTCA TGCGTCACCT GCATCTGCCG
CCGGTGTTCA ACCCGCTGGT CGGTGTCCTC ACGCAGAGCC CCACGATGGG GGCACTGCCG
ACGCTGCGGG CCGCGACCGA CCCCACCGTG CGGGGCGGGC AGTACTTCGG GCCGAGCGGA
CTGGGCGAGA TCCGCGGCTA CCCCGAGCTC GTCACGTCGA GCGCGCAGTC GCGCGACGTG
GACCTGGCCC GCCGGCTGTG GACGGTGTCC GAAGAGCTCA CCGGAGTGGC GTTTCCGCTC
TAG
 
Protein sequence
MTKWTTADIP SQSGRTAVVT GANTGLGLET AKALAARGAH VVLAVRDTEK GKRAADEITA 
AHPEAAVGVQ SLDLGSLRSV RTAAEALKAD FPRIDLLINN AGVMYPPKQT TEDGFELTFG
TNHLGHFALT GLLLENVLAA PNSRVVTVSS QGHRIRAAIH FDDLQWERSY SRVGAYGQSK
LSNLLFTYEL QRRLDTRDAI AVAAHPGVSN TELMRHLHLP PVFNPLVGVL TQSPTMGALP
TLRAATDPTV RGGQYFGPSG LGEIRGYPEL VTSSAQSRDV DLARRLWTVS EELTGVAFPL