Gene Fnod_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0545 
Symbol 
ID5452955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp602674 
End bp603696 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content39% 
IMG OID640874294 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001410065 
Protein GI154249240 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00109277 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA TTAAAAAAAG TAAAAAAAGC AAAGTGTGGA AGTACTGGCG AGAGTACAAA 
TGGTCGAATG TTTTTGAGAT GCTGAAGAAT ATGAAGGAAA AGCCAAAGCA ATGCACGGAA
AGGTGCGATG GGAAGGTTGT TGTGATAACG GGCGCAACTT CCGGTATTGG TTATTATACA
GCGAAGAAGT ACGCTTCTAT GGGTGCGCGA GTGATAACAA TAAATAGGAG TAAGGAAAAG
TCTGAGGCTT TGGTTAGAGA TATAGAACGG GAATTTGGCG TAAAAATTGA GTATTTTTTA
GCTGATTTGA GTAGTTTGAA AGATATATAC AAAGCTGCTG AGTTTTTATC ATGTCTTAAA
GAACCCATCG ATGTTTTGAT ACACAACGCC GGAGTGTATT TAGGCAAGCG CACATTAACC
GTCGATGGGC TTGAAACGAA TTTCGTTGTC CATTATCTTG CACCTTTTAT TATTAATTAC
CACCTCTTGG AAAAGTACAA AGAGGATAAA AAGGGGAGGA TTATCCTTGT TAGTTCTGAA
GGGTACAGGT TTGCTGTGTG GGGATTGAAT TTGGATGATT TGCAATTTGA AAAGGCAAGA
TACACCGGTT TAAAAGCCTA CGGTAGTGCA AAGCTTGCTC AGATTTTAAC GATGCACATC
TTCGCAGACT TACTGAAACC TTACAATGTT ACGATAAATG CGATGCACCC TGGTATGGTG
AGGACGAATA CCGGCAGGGA TAACAGTGCA CTTTATAGGT GGTTCAAAAA GACGTTTATA
GATAGTATTT CGCAAACACC AGAGATTTCA GCACAAGCGC TGTATTATTT AGGCGTCTCA
AAAGAAGTCG AGAATATCAC AGATAAATTT TTCCATCTCA CAAAGATAGA GGAACTAGCC
CCGCCGGCGA AAGATATGGA AGAAGCCAAA AAACTTTGGG ATTTAACTAT TAAGATGATT
GATTCTTTTG GATTAGGTAT TAAAAAATCT GTAGATTTTG ATGGGAGTGA TGGATGTGCG
TAA
 
Protein sequence
MEKIKKSKKS KVWKYWREYK WSNVFEMLKN MKEKPKQCTE RCDGKVVVIT GATSGIGYYT 
AKKYASMGAR VITINRSKEK SEALVRDIER EFGVKIEYFL ADLSSLKDIY KAAEFLSCLK
EPIDVLIHNA GVYLGKRTLT VDGLETNFVV HYLAPFIINY HLLEKYKEDK KGRIILVSSE
GYRFAVWGLN LDDLQFEKAR YTGLKAYGSA KLAQILTMHI FADLLKPYNV TINAMHPGMV
RTNTGRDNSA LYRWFKKTFI DSISQTPEIS AQALYYLGVS KEVENITDKF FHLTKIEELA
PPAKDMEEAK KLWDLTIKMI DSFGLGIKKS VDFDGSDGCA