Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0545 |
Symbol | |
ID | 5452955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 602674 |
End bp | 603696 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640874294 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001410065 |
Protein GI | 154249240 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00109277 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA TTAAAAAAAG TAAAAAAAGC AAAGTGTGGA AGTACTGGCG AGAGTACAAA TGGTCGAATG TTTTTGAGAT GCTGAAGAAT ATGAAGGAAA AGCCAAAGCA ATGCACGGAA AGGTGCGATG GGAAGGTTGT TGTGATAACG GGCGCAACTT CCGGTATTGG TTATTATACA GCGAAGAAGT ACGCTTCTAT GGGTGCGCGA GTGATAACAA TAAATAGGAG TAAGGAAAAG TCTGAGGCTT TGGTTAGAGA TATAGAACGG GAATTTGGCG TAAAAATTGA GTATTTTTTA GCTGATTTGA GTAGTTTGAA AGATATATAC AAAGCTGCTG AGTTTTTATC ATGTCTTAAA GAACCCATCG ATGTTTTGAT ACACAACGCC GGAGTGTATT TAGGCAAGCG CACATTAACC GTCGATGGGC TTGAAACGAA TTTCGTTGTC CATTATCTTG CACCTTTTAT TATTAATTAC CACCTCTTGG AAAAGTACAA AGAGGATAAA AAGGGGAGGA TTATCCTTGT TAGTTCTGAA GGGTACAGGT TTGCTGTGTG GGGATTGAAT TTGGATGATT TGCAATTTGA AAAGGCAAGA TACACCGGTT TAAAAGCCTA CGGTAGTGCA AAGCTTGCTC AGATTTTAAC GATGCACATC TTCGCAGACT TACTGAAACC TTACAATGTT ACGATAAATG CGATGCACCC TGGTATGGTG AGGACGAATA CCGGCAGGGA TAACAGTGCA CTTTATAGGT GGTTCAAAAA GACGTTTATA GATAGTATTT CGCAAACACC AGAGATTTCA GCACAAGCGC TGTATTATTT AGGCGTCTCA AAAGAAGTCG AGAATATCAC AGATAAATTT TTCCATCTCA CAAAGATAGA GGAACTAGCC CCGCCGGCGA AAGATATGGA AGAAGCCAAA AAACTTTGGG ATTTAACTAT TAAGATGATT GATTCTTTTG GATTAGGTAT TAAAAAATCT GTAGATTTTG ATGGGAGTGA TGGATGTGCG TAA
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Protein sequence | MEKIKKSKKS KVWKYWREYK WSNVFEMLKN MKEKPKQCTE RCDGKVVVIT GATSGIGYYT AKKYASMGAR VITINRSKEK SEALVRDIER EFGVKIEYFL ADLSSLKDIY KAAEFLSCLK EPIDVLIHNA GVYLGKRTLT VDGLETNFVV HYLAPFIINY HLLEKYKEDK KGRIILVSSE GYRFAVWGLN LDDLQFEKAR YTGLKAYGSA KLAQILTMHI FADLLKPYNV TINAMHPGMV RTNTGRDNSA LYRWFKKTFI DSISQTPEIS AQALYYLGVS KEVENITDKF FHLTKIEELA PPAKDMEEAK KLWDLTIKMI DSFGLGIKKS VDFDGSDGCA
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