Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0665 |
Symbol | |
ID | 6459014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 700787 |
End bp | 701692 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642724657 |
Product | short chain dehydrogenase |
Protein accession | YP_002015360 |
Protein GI | 194333500 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000125417 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00844242 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGAAATG ACAAATGGGA TGCCGGCAGG ATCGCCCGGC AGGATGGTCG TATAGCGCTC ATTAGCGGGG CAAATAGCGG TATAGGGTTT GATACCGCAG TGGTTCTTGC GGGAAAGGGT GCCGAGGTCG TTCTTGCTGT CCGTGACATC GGCAAGGGGG AGGAGGCCTG CAAGGCTATC CGGAAGGATT TTCCTGATGC TGCCCTTCAG GTGATGCTTC TCGATCTGGC TGATCTTTCA TCAGTGCGAC GGTTTGCTTA TGCTTTTCTG GCCCGTTATT CCAGGCTTGA TCTCCTGATC AACAATGCCG GTGTTATGGT TCCTCCTCAA CGATGCGTAA CTGTAGATGG TTTTGAACTG CAGTTCGGTA CCAATCATCT GGGGCATTTC GCACTGACGC TTCTTTTATC AGGGCTTCTC AAACAGACTC CTTCCAGCCG TGTTGTAACA GTGAGCAGCG GTGCTCACTA TTTTGGCAAG CTTGATTTTT CGGATTTGAA CTGGCAAAGG CGTCCCTACA GGAAATGGCA GGCCTATGGT GACAGTAAAC TTGCCAATTT GTATTTTACC CGCCAACTGC AGAGGCGCCT TGCAGAAGAT CATGCTTCGA CGATTGCCGT TGCTGCTCAT CCGGGGTGGA GCGGCACGAA TTTGCAGCGT TATGAGCCTC TGGCGATGCT GATGAACCGC TTCTTTGCTC AGACGTCTGC AATGGGGGCG CTTCCTGAGC TCTATGCTGC TACAGCCCGG GATGTTGCAG GCGCCGAGTA TTTCGGACCC GGCGGTATTG GCGGGTTACG CGGTTATCCG GTTCGATGTT CTTCAAGCAG GTTGTCGGAG GACCAGGGGG TTGGCCAACG GTTATGGGAG GTGTCTGAAG TTCTTACCGG GGTTTTCTGG CAGTGA
|
Protein sequence | MRNDKWDAGR IARQDGRIAL ISGANSGIGF DTAVVLAGKG AEVVLAVRDI GKGEEACKAI RKDFPDAALQ VMLLDLADLS SVRRFAYAFL ARYSRLDLLI NNAGVMVPPQ RCVTVDGFEL QFGTNHLGHF ALTLLLSGLL KQTPSSRVVT VSSGAHYFGK LDFSDLNWQR RPYRKWQAYG DSKLANLYFT RQLQRRLAED HASTIAVAAH PGWSGTNLQR YEPLAMLMNR FFAQTSAMGA LPELYAATAR DVAGAEYFGP GGIGGLRGYP VRCSSSRLSE DQGVGQRLWE VSEVLTGVFW Q
|
| |