Gene Paes_0665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0665 
Symbol 
ID6459014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp700787 
End bp701692 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content53% 
IMG OID642724657 
Productshort chain dehydrogenase 
Protein accessionYP_002015360 
Protein GI194333500 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000125417 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00844242 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAAATG ACAAATGGGA TGCCGGCAGG ATCGCCCGGC AGGATGGTCG TATAGCGCTC 
ATTAGCGGGG CAAATAGCGG TATAGGGTTT GATACCGCAG TGGTTCTTGC GGGAAAGGGT
GCCGAGGTCG TTCTTGCTGT CCGTGACATC GGCAAGGGGG AGGAGGCCTG CAAGGCTATC
CGGAAGGATT TTCCTGATGC TGCCCTTCAG GTGATGCTTC TCGATCTGGC TGATCTTTCA
TCAGTGCGAC GGTTTGCTTA TGCTTTTCTG GCCCGTTATT CCAGGCTTGA TCTCCTGATC
AACAATGCCG GTGTTATGGT TCCTCCTCAA CGATGCGTAA CTGTAGATGG TTTTGAACTG
CAGTTCGGTA CCAATCATCT GGGGCATTTC GCACTGACGC TTCTTTTATC AGGGCTTCTC
AAACAGACTC CTTCCAGCCG TGTTGTAACA GTGAGCAGCG GTGCTCACTA TTTTGGCAAG
CTTGATTTTT CGGATTTGAA CTGGCAAAGG CGTCCCTACA GGAAATGGCA GGCCTATGGT
GACAGTAAAC TTGCCAATTT GTATTTTACC CGCCAACTGC AGAGGCGCCT TGCAGAAGAT
CATGCTTCGA CGATTGCCGT TGCTGCTCAT CCGGGGTGGA GCGGCACGAA TTTGCAGCGT
TATGAGCCTC TGGCGATGCT GATGAACCGC TTCTTTGCTC AGACGTCTGC AATGGGGGCG
CTTCCTGAGC TCTATGCTGC TACAGCCCGG GATGTTGCAG GCGCCGAGTA TTTCGGACCC
GGCGGTATTG GCGGGTTACG CGGTTATCCG GTTCGATGTT CTTCAAGCAG GTTGTCGGAG
GACCAGGGGG TTGGCCAACG GTTATGGGAG GTGTCTGAAG TTCTTACCGG GGTTTTCTGG
CAGTGA
 
Protein sequence
MRNDKWDAGR IARQDGRIAL ISGANSGIGF DTAVVLAGKG AEVVLAVRDI GKGEEACKAI 
RKDFPDAALQ VMLLDLADLS SVRRFAYAFL ARYSRLDLLI NNAGVMVPPQ RCVTVDGFEL
QFGTNHLGHF ALTLLLSGLL KQTPSSRVVT VSSGAHYFGK LDFSDLNWQR RPYRKWQAYG
DSKLANLYFT RQLQRRLAED HASTIAVAAH PGWSGTNLQR YEPLAMLMNR FFAQTSAMGA
LPELYAATAR DVAGAEYFGP GGIGGLRGYP VRCSSSRLSE DQGVGQRLWE VSEVLTGVFW
Q