| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3314 |
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| Symbol | |
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| ID | 7090810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 3638732 |
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| End bp | 3639694 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643466621 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002363582 |
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| Protein GI | 217979435 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0167098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGA TATTTGGAGC GACATCCACC ACAGACGAGG TGCTTGAAGG CGTAGACCTG
AGCGGCAAGC GCATTCTGGT AACGGGCGTT TCCGCCGGGC TCGGCGTCGA GACCGCCCGC
ACATTGGCCG CTCACGGCGC CTTGGTGGTC GGCGCCGCGC GCGACCTGAG CAAGGCCAAG
GCCGCAACCG AGCAGGTTCG CGCAGGGGCG GCCAAAGGCG GCGGATTGGA GCTGGTTGAG
CTCGATCTGG CGTCCCTCGC CAGCGTGCGC GCCTGCGGCG ACGCCCTGGT GTCGAGCGGG
AAGCCGTTTG ACCTCGTCAT CGCCAATGCG GGCGTCATGG CCTGCCCGAA GAGCCAGACG
GCAGACGGCT TCGAGACCCA GTTCGGCACC AACCACCTCG GCCACTTCGT GTTGGTGAAC
CGGATCGCCT CGCTGCTGAA ACCCGGCTCG CGGGTGGTCA ATCTGTCTTC GGCGGGCCAC
CGGTTTTCCG ATGTCGACCT CGAGGATCCG AACTTCGAAC ATACGCCCTA TACGGAGTTC
GGCGCTTATG GCCGCTCCAA AACGGCCAAT ATCCTGTTCG CCGTCGAATT CGATCGGCGG
CACAAGGCGA ATGGCGTGCG AGCCACAGCC GTGCATCCCG GCGGCATCCA GACCGAACTC
GGTCGCCACA TGACTCCTGA GGCCATGCAG AACCTTGTCG ATCAGATCAC TGCGGCGGCC
GCGGCTTCCG GTCAGCCGGC CTTCGCCTGG AAGACGATCC CGCAGGGAGC GGCGACGACG
GTCTGGAGCG GCGTGGTTGC GTCCGCCGAC GAGGTCGGCG GCCTCTATTG CGAAGACTGC
CACGTGGCCG AGCTCGCGGA AGGCGAGGGC ATCCGCGGCG GCGTGCGCGC CTACGCGCTC
GACCCGGATC ACGCCAAGGC GCTCTGGGCC AAGAGCGAGC AGATGGTCGG CGAGCAGTTC
TGA
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| Protein sequence | MAKIFGATST TDEVLEGVDL SGKRILVTGV SAGLGVETAR TLAAHGALVV GAARDLSKAK
AATEQVRAGA AKGGGLELVE LDLASLASVR ACGDALVSSG KPFDLVIANA GVMACPKSQT
ADGFETQFGT NHLGHFVLVN RIASLLKPGS RVVNLSSAGH RFSDVDLEDP NFEHTPYTEF
GAYGRSKTAN ILFAVEFDRR HKANGVRATA VHPGGIQTEL GRHMTPEAMQ NLVDQITAAA
AASGQPAFAW KTIPQGAATT VWSGVVASAD EVGGLYCEDC HVAELAEGEG IRGGVRAYAL
DPDHAKALWA KSEQMVGEQF
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