| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3355 |
|---|
| Symbol | |
|---|
| ID | 6311315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3583504 |
|---|
| End bp | 3584364 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642652079 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001926041 |
|---|
| Protein GI | 188582596 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.886848 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCTCG ACGGTCGCAC CGCCCTCGTC ACCGGCGCCT CCTCCGGGAT CGGCGCCGAG
ACGGCCCTGG GGCTCGCCCG CCTCGGGGCG CGGGTGGGCC TCGTGGGACG CGACCGCGCG
CGCACCGAAC GCGCCGCCGC GCATCTGCGC CGGGAGACCG GCGGCGCGGC GGACGTCTTC
CTCGCCGACC TGTCGAGCCA GGCCGAGATC CGCCGGCTCG CGGGGGAGGT GAGGGCGCAC
TATCCCGCCC TCGACATCCT CGTGAACAAT GCCGGCGCGA TCTTCTCCGA GCGCCACGTC
ACCGCCGACG GGATCGAGCG GAGCTGGGCC CTCGACCATC TCGCCTACGT GCTGCTGACG
CACGAACTGC GCGCGCCGCT GGAAGCGGCA CCGCAGGCCC GCATCGTCAA TCTCGCCTCC
GCCGCCCATA CCCGCGGGCG CATCGATTTC GAGGATCTCG GCGGCGAGCG CCGCTATTCG
GCGATGAAGG CCTATTCCCA GGCCAAGCTC GGCAACGTGC TGTTCACCTA CGCCCTGGCC
CGGCGCCTTG CCGGCAGCAG CGTCACCGTC AACGCCGTGC ATCCGGGGGT CGTGGCGAGC
GACTTCGCCA AGAACACCAG CGGCGGGCTC GGCTTCGCCT GGAGCCTGAT CCGTCCCTTC
CTGATCTCGA CCGAGGCGGG CGCCAGGACC TCGCTGCACG TCGCCACCGC GCCCGAACTC
GACGGCGTGA GCGGGCGCTA TTTCGCCAAG TGCCGCGAGA CGGCCTCCTC CGCCCGCAGC
CGGGACGAGG CCCTTCAGGA ACGAGTCTGG AGCCTGAGCC GGCATCAGGC CGGGATCGAG
GCGTCGCGTC CCGTCCGATA A
|
|---|
| Protein sequence | MRLDGRTALV TGASSGIGAE TALGLARLGA RVGLVGRDRA RTERAAAHLR RETGGAADVF
LADLSSQAEI RRLAGEVRAH YPALDILVNN AGAIFSERHV TADGIERSWA LDHLAYVLLT
HELRAPLEAA PQARIVNLAS AAHTRGRIDF EDLGGERRYS AMKAYSQAKL GNVLFTYALA
RRLAGSSVTV NAVHPGVVAS DFAKNTSGGL GFAWSLIRPF LISTEAGART SLHVATAPEL
DGVSGRYFAK CRETASSARS RDEALQERVW SLSRHQAGIE ASRPVR
|
|---|
| |