Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0077 |
Symbol | |
ID | 5668502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 94301 |
End bp | 95116 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641239005 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001504450 |
Protein GI | 158311942 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGACGA TCGTGCTCGT CGGAGCCACG TCCGGCCTCG GCCGTCACGC CGCGCACATC CTGAAGGAGG CCGGCCACCG GCTCGTCCTC GTCGGCCGCG ACCCGAAACG GGCGGCCCAG CTGGCCCACG ACCTGCCCAC CGCCACAGTC ATCGCTGCCG ACATCTCGAC GGCGGCTGGC ATCGACCTCG TGGCCGAAAA GGTACATGCC GTCGTCGACC GCGTGGACAC CCTGGTGAAC AACGCCGGCG TCATGCTTCC CACCCGCCGC ACCACCAGCG AGGGCATCGA GCTGAACCTA GCCGTGCATC ATCTCGCGCC CTACTCGACG ACCGCCCGGC TCCTCCCGCT GCTGCGCCAC GGCGACGGCC GGATCATCAA CGTCAACTCC GAGGGCCATC GCGCCCCGAT GCGCGGGGCT GGGCCGGTCC ACCTCGACCT GACCGACCTG AACAGCGAAC GGCGCTACGA CCCGTTCCTC ACCTACAGCC GCACGAAGCT GGCCAACCTG CTCTTCACCT ACGAACTACA ACGGCGTCAT CCCGAACTGA CCGTCGCCGC AGTCCACCCG GGCATGGTCC GCACCAACCT GGGCCGGCAC TTCCCACGAC TCCGGGTCGC CCTGCTACTC CCGTTCATGA TGTCCCCGCG GCAAGGGGCG CGGCCGGTGA TCCACCTGGC TTCCGCACCC ACGATCAGCG CGGGACGCTA CTACGACCGG CTCAGACCCG TCTCCTCGTC GCCCGCCTCC TACGACACCA ACACCGCCCG CCGGCTGTGG GAGATCACGT CCGACATTCG CGGCCCCTTC GGATGA
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Protein sequence | MRTIVLVGAT SGLGRHAAHI LKEAGHRLVL VGRDPKRAAQ LAHDLPTATV IAADISTAAG IDLVAEKVHA VVDRVDTLVN NAGVMLPTRR TTSEGIELNL AVHHLAPYST TARLLPLLRH GDGRIINVNS EGHRAPMRGA GPVHLDLTDL NSERRYDPFL TYSRTKLANL LFTYELQRRH PELTVAAVHP GMVRTNLGRH FPRLRVALLL PFMMSPRQGA RPVIHLASAP TISAGRYYDR LRPVSSSPAS YDTNTARRLW EITSDIRGPF G
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