Gene Franean1_0077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0077 
Symbol 
ID5668502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp94301 
End bp95116 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content69% 
IMG OID641239005 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001504450 
Protein GI158311942 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGACGA TCGTGCTCGT CGGAGCCACG TCCGGCCTCG GCCGTCACGC CGCGCACATC 
CTGAAGGAGG CCGGCCACCG GCTCGTCCTC GTCGGCCGCG ACCCGAAACG GGCGGCCCAG
CTGGCCCACG ACCTGCCCAC CGCCACAGTC ATCGCTGCCG ACATCTCGAC GGCGGCTGGC
ATCGACCTCG TGGCCGAAAA GGTACATGCC GTCGTCGACC GCGTGGACAC CCTGGTGAAC
AACGCCGGCG TCATGCTTCC CACCCGCCGC ACCACCAGCG AGGGCATCGA GCTGAACCTA
GCCGTGCATC ATCTCGCGCC CTACTCGACG ACCGCCCGGC TCCTCCCGCT GCTGCGCCAC
GGCGACGGCC GGATCATCAA CGTCAACTCC GAGGGCCATC GCGCCCCGAT GCGCGGGGCT
GGGCCGGTCC ACCTCGACCT GACCGACCTG AACAGCGAAC GGCGCTACGA CCCGTTCCTC
ACCTACAGCC GCACGAAGCT GGCCAACCTG CTCTTCACCT ACGAACTACA ACGGCGTCAT
CCCGAACTGA CCGTCGCCGC AGTCCACCCG GGCATGGTCC GCACCAACCT GGGCCGGCAC
TTCCCACGAC TCCGGGTCGC CCTGCTACTC CCGTTCATGA TGTCCCCGCG GCAAGGGGCG
CGGCCGGTGA TCCACCTGGC TTCCGCACCC ACGATCAGCG CGGGACGCTA CTACGACCGG
CTCAGACCCG TCTCCTCGTC GCCCGCCTCC TACGACACCA ACACCGCCCG CCGGCTGTGG
GAGATCACGT CCGACATTCG CGGCCCCTTC GGATGA
 
Protein sequence
MRTIVLVGAT SGLGRHAAHI LKEAGHRLVL VGRDPKRAAQ LAHDLPTATV IAADISTAAG 
IDLVAEKVHA VVDRVDTLVN NAGVMLPTRR TTSEGIELNL AVHHLAPYST TARLLPLLRH
GDGRIINVNS EGHRAPMRGA GPVHLDLTDL NSERRYDPFL TYSRTKLANL LFTYELQRRH
PELTVAAVHP GMVRTNLGRH FPRLRVALLL PFMMSPRQGA RPVIHLASAP TISAGRYYDR
LRPVSSSPAS YDTNTARRLW EITSDIRGPF G