Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0868 |
Symbol | |
ID | 8410383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 838795 |
End bp | 839643 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645019203 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003176705 |
Protein GI | 257386932 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.178945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.215411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACATCGA CGATCGTCCT CACTGGTGGC ACCAGCGGTA TCGGCCGGGA GGCTGCGATC CGGTTAGCCG AGGGTGGCGC AGAGGTAGCC GTAGTGGGCC GTGATGCGGA CCGCGGTCGC GAACTCGCCG ACACCGAGTC TGCGGGCGAG ATACGATTCT ACGAGGCTGA TCTCGGCACG CAGGCAGCTG TTCGTTCCTT AGCAGCTGCG TTGCGCAGTC AGTACGACAG TATCGATGTG CTCGCGCACA ACGCCGGGAC CTGTTCACCG ACCCGCACTG AGACTGCTGA CGGCGTCGAG TTGACGCTGG CTGTCAACCA CGCCGCCCCG TATCTGCTAA CCCACGAGTT GATCGGTCGA CTCAGAGCGA ACACTTCGAG CCGCATCGTC TTGACGATGT CTCATCTCCA TCGCCTCGGC GAACTGGCGT TCGACGACCT ACAGATGCGG TCTGCATACG ACTGGGTCGA CGCCTACGCT CGCGCCGAAC TGGCGAACGT GGTCTTCATC GCGGAACTGG CCGAGCGACT CGACCCCAGC GACGTCACAG CGAACTGTTT TCATCCCGGC TTCGTCCCCG GGACCAACAT CGTCCGGAAC GTACCGTGGT GGCGGAAAGT GCTCGCTCGC GTCGCGGATA TCCTACCCTT CTGGGGGGTC GACGTGGGAA CCGCCGCGAA CCGACTTGTC TCGCTGGCCA CCGATCCGAG CTTCGAGACT CGGTCTGGCC GTTATTACCG AGATGACGCC CCAGCCGAGC TCCCGCCGGA GGCGCAGGAT CCGGCTGTCC GCCAGCGGGT CTGGGAGACG ACCGCATCGG TAGTCGGTGT CGATGCGGAG TGGCCATGA
|
Protein sequence | MTSTIVLTGG TSGIGREAAI RLAEGGAEVA VVGRDADRGR ELADTESAGE IRFYEADLGT QAAVRSLAAA LRSQYDSIDV LAHNAGTCSP TRTETADGVE LTLAVNHAAP YLLTHELIGR LRANTSSRIV LTMSHLHRLG ELAFDDLQMR SAYDWVDAYA RAELANVVFI AELAERLDPS DVTANCFHPG FVPGTNIVRN VPWWRKVLAR VADILPFWGV DVGTAANRLV SLATDPSFET RSGRYYRDDA PAELPPEAQD PAVRQRVWET TASVVGVDAE WP
|
| |