Gene Hmuk_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0868 
Symbol 
ID8410383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp838795 
End bp839643 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content64% 
IMG OID645019203 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003176705 
Protein GI257386932 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.178945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.215411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGA CGATCGTCCT CACTGGTGGC ACCAGCGGTA TCGGCCGGGA GGCTGCGATC 
CGGTTAGCCG AGGGTGGCGC AGAGGTAGCC GTAGTGGGCC GTGATGCGGA CCGCGGTCGC
GAACTCGCCG ACACCGAGTC TGCGGGCGAG ATACGATTCT ACGAGGCTGA TCTCGGCACG
CAGGCAGCTG TTCGTTCCTT AGCAGCTGCG TTGCGCAGTC AGTACGACAG TATCGATGTG
CTCGCGCACA ACGCCGGGAC CTGTTCACCG ACCCGCACTG AGACTGCTGA CGGCGTCGAG
TTGACGCTGG CTGTCAACCA CGCCGCCCCG TATCTGCTAA CCCACGAGTT GATCGGTCGA
CTCAGAGCGA ACACTTCGAG CCGCATCGTC TTGACGATGT CTCATCTCCA TCGCCTCGGC
GAACTGGCGT TCGACGACCT ACAGATGCGG TCTGCATACG ACTGGGTCGA CGCCTACGCT
CGCGCCGAAC TGGCGAACGT GGTCTTCATC GCGGAACTGG CCGAGCGACT CGACCCCAGC
GACGTCACAG CGAACTGTTT TCATCCCGGC TTCGTCCCCG GGACCAACAT CGTCCGGAAC
GTACCGTGGT GGCGGAAAGT GCTCGCTCGC GTCGCGGATA TCCTACCCTT CTGGGGGGTC
GACGTGGGAA CCGCCGCGAA CCGACTTGTC TCGCTGGCCA CCGATCCGAG CTTCGAGACT
CGGTCTGGCC GTTATTACCG AGATGACGCC CCAGCCGAGC TCCCGCCGGA GGCGCAGGAT
CCGGCTGTCC GCCAGCGGGT CTGGGAGACG ACCGCATCGG TAGTCGGTGT CGATGCGGAG
TGGCCATGA
 
Protein sequence
MTSTIVLTGG TSGIGREAAI RLAEGGAEVA VVGRDADRGR ELADTESAGE IRFYEADLGT 
QAAVRSLAAA LRSQYDSIDV LAHNAGTCSP TRTETADGVE LTLAVNHAAP YLLTHELIGR
LRANTSSRIV LTMSHLHRLG ELAFDDLQMR SAYDWVDAYA RAELANVVFI AELAERLDPS
DVTANCFHPG FVPGTNIVRN VPWWRKVLAR VADILPFWGV DVGTAANRLV SLATDPSFET
RSGRYYRDDA PAELPPEAQD PAVRQRVWET TASVVGVDAE WP