| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0587 |
|---|
| Symbol | |
|---|
| ID | 4876332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 641445 |
|---|
| End bp | 642365 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640137901 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001068890 |
|---|
| Protein GI | 126433199 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA ACACCAAATG GACTGCGGCG GACGTGCCCG ACCAGGAAGG CCGTGTCGCC
GTCATCACCG GCGCCAACAC GGGTATCGGT TACGAGGCGG CGGCGGTGCT GGCCGCCAAG
GGCGCCCACG TGGTGCTCGC GGTGCGCAAC ACCGACAAGG GCGGCGCCGC GGCCGAGCGC
ATCCGTTCTG CGCTGCCGCA TGCCGACGTG ACCGTTCGGG AACTCGACCT GACGTCGCTG
GACAGCATCC GCGCGGCCGC GGACGGGCTG CGCGCCGACT ATCCGCGGAT CGACCTGCTG
ATCAACAACG CGGGCGTGAT GATGACCCAG AAGGGCACCA CCAAGGACGG TTTCGAGCTC
CAGCTCGGCA CCAACCACCT CGGCCACTTC GCGCTCACCG GCCAACTGCT CGACAACCTG
CTCCCCGTCG AGGGGTCGCG GGTGGTGACC GTCAGCAGCA ACGCCCACCG GTGGGGCCGC
GTGAACTTCG ACGATCTGCA GTCCGAGCGA AGCTACAACC GGGTCACCGC CTACGGGCAG
AGCAAGCTGG CCAACCTGCT GTTCACCTAT GAGCTCAACC GCCGACTGTC GGCGAAGGGT
GCGCCGACCA TCGCCGTCGC CGCCCATCCC GGGACATCGA GTACCGAGCT GACCCGCAAC
CTGTGGCCGG TGGCCCGCCG GCCCGTCGAA CTCGTCTGGG GGCTTGTCTC GCAGACACCG
GAGATGGGTG CGTTGCCGAC ACTGCGGGCT GCCACCGACC CGGACGTGCG CGGCGGGCAG
TACTACGGGC CCGACGGCAT CGGGGAACAA CGCGGCCACC CGAAACTCGT GCAGTCCAAC
GCCCGCTCGT ACGACGAGGC CGCACAGCGC GGGTTGTGGA GCGTGTCCGA GGAACTCACC
GGCGTCACGT TCCCCGTCTG A
|
|---|
| Protein sequence | MSANTKWTAA DVPDQEGRVA VITGANTGIG YEAAAVLAAK GAHVVLAVRN TDKGGAAAER
IRSALPHADV TVRELDLTSL DSIRAAADGL RADYPRIDLL INNAGVMMTQ KGTTKDGFEL
QLGTNHLGHF ALTGQLLDNL LPVEGSRVVT VSSNAHRWGR VNFDDLQSER SYNRVTAYGQ
SKLANLLFTY ELNRRLSAKG APTIAVAAHP GTSSTELTRN LWPVARRPVE LVWGLVSQTP
EMGALPTLRA ATDPDVRGGQ YYGPDGIGEQ RGHPKLVQSN ARSYDEAAQR GLWSVSEELT
GVTFPV
|
|---|
| |