Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_09140 |
Symbol | |
ID | 8632550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1043682 |
End bp | 1044500 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | short-chain dehydrogenase of unknown substrate specificity |
Protein accession | YP_003313698 |
Protein GI | 269794243 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.334901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAGA CCATCGTCAT CACCGGTGCG AGCGACGGCA TCGGTGCCGC GGCCGCGCGC CGCCTCGCCG CCTCGGGGGA GCGCGTCGTG GTCGTGGGCC GCTCGCCCGA GCGCACCCGC GCCGTCGCCG AGGAGATCGG TGCGGACCAC CACCTGGCCG ACTTCGCCGA CCTCTCGCAG GTCCGCCGCC TGGCCGACGA GCTGCTGGCC GCCTACCCGT CGATCGAGGT GCTCGCCAAC AACGCAGGCG GGATCATGGG CGCTCGCCAG ACCACCGTCG ACGGCTACGA GAAGACCTTC CAGGTCAACC ACCTCGCGCC GTTCCTCCTC ACGCAGCTGC TCATGCCCTC CCTGATCGCG GGCCGGGCCA CCGTGATCCA GACTGCCAGC GTCGCCGCCC GGGTCTTCGC GAAGTTCGAC GTCGAGGACC TGCAGGGCGA GTACGCCTAC TCGCCGCAGG CTGCCTACGG CAACGGCAAG CTCGCCAACA TCCTCTTCAC CTCCGAGCTC CAGCGCCGCT ACGGCGACCA GGGCATCTCC GCCGTGGCGT TCCACCCCGG CGTCGTCGCC ACGAGCTTCG CGAGCGACAC CACCAGCCTC ATGCGGTTCA TCTACCACAC GCCCCTCAAG CGCCTCTTCA CGATCCGCCC GGACAAGGCC GCCGACGAGC TCGTCTGGCT CGCCGAGGGC ACCCCGGGGG AGACCTTCAC GCCCGGCGCG TACTACGAGT CCAAGGCCGT GGCGAAGAAC GTCAACCCGC TCAGCCGCGA CGCCGACCTC GCCGCACGCC TGTGGGAGGA GTCCGAGGCG CTCGTCTGA
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Protein sequence | MPKTIVITGA SDGIGAAAAR RLAASGERVV VVGRSPERTR AVAEEIGADH HLADFADLSQ VRRLADELLA AYPSIEVLAN NAGGIMGARQ TTVDGYEKTF QVNHLAPFLL TQLLMPSLIA GRATVIQTAS VAARVFAKFD VEDLQGEYAY SPQAAYGNGK LANILFTSEL QRRYGDQGIS AVAFHPGVVA TSFASDTTSL MRFIYHTPLK RLFTIRPDKA ADELVWLAEG TPGETFTPGA YYESKAVAKN VNPLSRDADL AARLWEESEA LV
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