Gene RoseRS_4028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4028 
Symbol 
ID5211011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5044069 
End bp5044947 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content59% 
IMG OID640597617 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001278323 
Protein GI148658118 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.251041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGA AACCTATCTG TCTCATCACC GGTGCGACGT CGGGCATTGG CGAAGTGACC 
GCGCGTGAAC TGGCGCGCCG GGGAATGCAT GTTGTCATCG TCGGGCGCAG CGCGGAGCGG
GTTGCTGCGA CGGTTGCGCG CATCAAACAG GCGACCGGCG TTGAGATCGA GACGCTGATC
GCCGATCTGT CATCACAGGC TGGTGTCCGT TCGGTTGCGG AAGCATTTTT GCAACGGCAT
CGACGCCTTG ATGTGCTGAT CAATAATGCG GGCGGTTTTT TCGCCTCGCG CCAGGTCAGC
GCCGATGGCA TCGAACTGAC ATGGGCGCTG AATCATATGA GCTACTTTCT GTTGACCAAT
CTGTTGATCG ACACTCTGCG CGCCAGCGCG CCAGCACGGG TGATCAACGT CTCATCAGAC
GCGCACCGCG GCGGCGTCAT GCGCTGGGAT GACCTCCTGT TCACCCGCGG CTACAATGGC
TGGGCGGCTT ATGCACAGTC AAAACTGGCG AATATCCTCT TCTCGAACGA ACTGGCACGT
CGTCTGGAAG GCACAGGCGT GACCTCGAAC GCGCTCCATC CCGGATTTGT GGCCACCCGT
TTCGCACATA ACAATGGTAT CATCTGGGGC GGGTTGATGG CGCTGATGCA GCGCCTGTTC
GCTATCACTC CAGAAGAAGG TGCGCAAACG TCGATCTACC TGGCTACAGC GCCTGAGGTT
GCGGCAATCA GCGGCAGGTA TTTTGTCAAA TCACGCGAGA CTTCGCCCGC GCCGCAGGCG
CAGGACATGG CAGCAGCGGC GCGTTTGTGG GAGATAAGCG AGCGCATGCT CGTCAACTCT
GCGCCAGTTC TTCAAGGCGG CGCACATTCA CCAGCGTAA
 
Protein sequence
MNQKPICLIT GATSGIGEVT ARELARRGMH VVIVGRSAER VAATVARIKQ ATGVEIETLI 
ADLSSQAGVR SVAEAFLQRH RRLDVLINNA GGFFASRQVS ADGIELTWAL NHMSYFLLTN
LLIDTLRASA PARVINVSSD AHRGGVMRWD DLLFTRGYNG WAAYAQSKLA NILFSNELAR
RLEGTGVTSN ALHPGFVATR FAHNNGIIWG GLMALMQRLF AITPEEGAQT SIYLATAPEV
AAISGRYFVK SRETSPAPQA QDMAAAARLW EISERMLVNS APVLQGGAHS PA