Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A2134 |
Symbol | |
ID | 3692943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 2598315 |
End bp | 2599304 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637732388 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | YP_337285 |
Protein GI | 76818638 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.331088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATGCAT GGAGCGCGCA ACACGTGCCG CCGCAGGGCG GAAAAGTCGC GGTCGTCACG GGGGCCAACA GCGGCCTCGG CTGGCAGATC GCGCAAACGC TCGCCGCCAA GGGCGCGCAA GTCGTGATGG GCTGCCGGGA TACGGCCAAG GGCGAACTGG CCGCGCATGC GATCCGCACC CGCTATCCGC GCGCCCGAAT CGAAGTCGAA GCGCTCGATC TCGCCGACCT CGCCAGCGTC TGCCGTTTCG CCGACGCCGT CGCCGATCGC CACGGCCGCG TCGACATTCT CTGCAACAAC GCGGGCGTGA TGTTCCTGCC GCTGCGCCAC ACGCGCGATG GCTTCGAAAT GCAGATGGGC ACGAACCACC TCGGCCACTT CGCGTTGACG GGGCTGTTGC TGCCCGCGTT GCGCGCATCG CACCGCGCGC GCGTCGTGAC GATGTCGAGC GGCTTCAACC GGCTCGGCAA GATCCGCCTC GACAACATGC TCGCCGAGCG CGGCTACAAC AAGTACCGCG CGTATTGCGA CAGCAAGCTC GCGAACCTGA TGTTCACGCT CGAGCTGCAG CGCCGCTTCG ATCAAGCGTG CCTGCCGATC CTGAGCGTGG CCGCGCACCC CGGCTATGCG GCCACCCACC TGCAGTTCGC GGGCCCCGAA ATGGCGAACT CGTCGCTCGG CACGTTCGCG ATGCGCCTGT CGAACCGGCT CGTCGCCCAA TCGGCCGATG TCGGCGCGCT GCCCGCGATC CATGCGGCGA CGGCAGTCGA CGTCGACGGC GGCGCATACA TCGGCCCGGC CCATCTCTGC GAGATGCGCG GCTATCCCGC CGAGGCACGC ATCCCGCGTC AGGCGCGCGA CGTGCGCATG GGCAAGCGCC TGTGGGAAAA ATCCGAGCAA CTGACCGGCG TGCGCTATCT CGACACGCCG CCGCCGCCCG GTTCGCGCCG CCGCGCATCG CGCGACGACG CGACGTTCGG CGCGCTCTGA
|
Protein sequence | MHAWSAQHVP PQGGKVAVVT GANSGLGWQI AQTLAAKGAQ VVMGCRDTAK GELAAHAIRT RYPRARIEVE ALDLADLASV CRFADAVADR HGRVDILCNN AGVMFLPLRH TRDGFEMQMG TNHLGHFALT GLLLPALRAS HRARVVTMSS GFNRLGKIRL DNMLAERGYN KYRAYCDSKL ANLMFTLELQ RRFDQACLPI LSVAAHPGYA ATHLQFAGPE MANSSLGTFA MRLSNRLVAQ SADVGALPAI HAATAVDVDG GAYIGPAHLC EMRGYPAEAR IPRQARDVRM GKRLWEKSEQ LTGVRYLDTP PPPGSRRRAS RDDATFGAL
|
| |