Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3830 |
Symbol | |
ID | 5735694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4809220 |
End bp | 4810077 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641280982 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001546594 |
Protein GI | 159900347 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000468983 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGTA AAGTTTGTTT GGTCACCGGG GCTACTGGTG GTATCGGCAA GGTAACAGCC TTAGAACTAG CGCGTCAAGG CGCGACGGTC GTGATTATTG GGCGGCATCC GTTGCGCACC GAAGGCGTTA CCGAGATGAT CAAACGCGAA ACTGGCAATC CCAATGTTAG CTATATTTTG GCCGATTTAT CCAAGCAAGT TGATGTACGC AGGGCTGCCG CCGAATTTTT GAGCAAACAT CATCAATTGC ATATTTTGGT CAATAATGCT GGAGCATTTT ATAACTCACG CCAAGAAAGT GCCGATGGCA TCGAATTAAC CATGGCGCTC AATCATTTAG CCTACTTTCT ATTAACCGAT TTGCTGTTGG ATACAATCAA AGCTAGCGCT CCTGCCCGAA TTATCAATGT TTCTTCTGAG GCTCATCGGA TGGGCGCGAT GGATTTCAAC GATCTTGAAG GCAAGCGCAA ATGGGGTGGC TGGCGCATGT ATGGTCGTTC CAAATTGGCC AATATTCTAT TTACCAAAGA GCTTGCCCGC CGTTTGGCAG GCACCGATGT CACGGTCAAC TGCTTGCATC CAGGCGTGGT TTCAACCGGC TTTGCTGCCA ACAACGGATT CTTTGGCATT GCCATGCGCA AATTAATGGA TCTTGGCTCG ATCAGCGCCG AAAAAGGGGC CGAAACCACC TTGTATCTTG CCACATCGCA CGAAGTTGAG CATCTCACGG GCTTGTATTT CGATAAAAAG AAACCACGTG AATCCAGCCC AGCCTCGCAC GATCAAACTG CCGCCGAAAA GCTCTGGCAG TGGAGCGAAA CCAAAGTTAA GCAAATCAAC GAGCAACAAG CAGCGTAA
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Protein sequence | MKGKVCLVTG ATGGIGKVTA LELARQGATV VIIGRHPLRT EGVTEMIKRE TGNPNVSYIL ADLSKQVDVR RAAAEFLSKH HQLHILVNNA GAFYNSRQES ADGIELTMAL NHLAYFLLTD LLLDTIKASA PARIINVSSE AHRMGAMDFN DLEGKRKWGG WRMYGRSKLA NILFTKELAR RLAGTDVTVN CLHPGVVSTG FAANNGFFGI AMRKLMDLGS ISAEKGAETT LYLATSHEVE HLTGLYFDKK KPRESSPASH DQTAAEKLWQ WSETKVKQIN EQQAA
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