| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1920 |
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| Symbol | |
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| ID | 7399872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1923552 |
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| End bp | 1924424 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643708991 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002566568 |
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| Protein GI | 222480331 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.108282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCATCGA ACGACCTTTC CGACCGCGTG ATCGCCCTCA CGGGCGCGAC CAGCGGTATC
GGCCGTCGTG CGGCCGTGAC GCTGGCCGAA CGCGGAGCCA CCGTCGCCGC AGTCGGGCGG
AATCGGGAGC GTGGCGAGGC GCTCGCCGCC GAGAGCGACG CGGCGGCCGG GACGATCCGG
TTTCACCGCG CCGATCTGGC GACCCAGTCG GCGGTTCGCG ATCTGGCCGC CGAACTCCGC
GAATCGTACG ATCGGCTCGA CGTTCTCGCG CACAACGCCG GGCTCTCGGT GAGGTCGCGG
ACGGAGACCG CAGACGGGAT CGAACTCACG CTGGCCGTGA ACCACCTCGC GCCGTACCTC
CTCACCCGCG AGCTGTTCGA CCAGCTCGCC GGCTCGGCGC CCGCCCGGGT CGTCGTCACC
GCCTCCGACC TCCATCGGCG TGCGACGCTC GACTTCGACG ACCTCCAGTT CGCCGACGGC
TACGACCCCT TGGAGGCGTA CGCCCGATCG AAGCTCGCGA ACGTCGCGTT CACGCTCGAA
CTCGCCGATC GGATCCCGGA GGCAGCGGGA GTCACGGCGA ACTGCCTCCA TCCGGGGTTC
GTCCCCTCGA CGAACCTGTT CCGCGACGCC GCGCTCCGAA CCCGGCTCGC GGTCCGCATC
GCGGGGCTCC TGCCCGGCGT CGGGACGACG CGCCGAGCCG CGGCCGACCG CCTCGTACGA
CTCGTCGCGT CACCGGAGTA CGCCGAGCGA ACCGGTCGCT ACGTCGGCGA GGAAGAAATG
ACGCCCGCGG ACGACACGGT CGACTCCGAG ACGCGCGAGC GGCTCTGGAG CGTCAGCGCC
GACCTCGTCG GGATCGACCC CGACTGGCCG TGA
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| Protein sequence | MSSNDLSDRV IALTGATSGI GRRAAVTLAE RGATVAAVGR NRERGEALAA ESDAAAGTIR
FHRADLATQS AVRDLAAELR ESYDRLDVLA HNAGLSVRSR TETADGIELT LAVNHLAPYL
LTRELFDQLA GSAPARVVVT ASDLHRRATL DFDDLQFADG YDPLEAYARS KLANVAFTLE
LADRIPEAAG VTANCLHPGF VPSTNLFRDA ALRTRLAVRI AGLLPGVGTT RRAAADRLVR
LVASPEYAER TGRYVGEEEM TPADDTVDSE TRERLWSVSA DLVGIDPDWP
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