Gene Anae109_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1583 
Symbol 
ID5377058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1780175 
End bp1781224 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content73% 
IMG OID640843092 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001378771 
Protein GI153004446 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.216927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0361789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGCC CGAGCGAGAT GGGACGGCGG TCGTTCCTCG AGATGGCGGC CGCGGCCGCC 
GTCGCGGGCG TCGCCTGCCG CGCGGAGCCG GGCGGAAGGG ACCGGGAGGC AGGCGTGTCG
ACGCGATCTC GGGAGCTCGC CGGCAAGTGC TGCCTCGTCA CCGGCGCCAC CTCCGGCATG
GGCGCGGTCA CCGCCCTCGA GCTGGCGCGG CTCGGGGCGA CGGTCGTCGT CTCCGGGCGC
AGCGCGGAGA GCTGCGCCTC GCAGGCCGAG GCGATCAGGC GCGAGACCGG CGCGCGCGTC
GAGACCGCCG TGGCCGATCT GGGATCCCTC GCTCAGGTCC GCAGGATGGC GGCCGAGGTC
GCGAGCCGGT TCGAGCGGCT CGACGTGCTG GTGAACAACG CCGGTACGCG CCTGGAGCAG
CGGAGCGTGA CGGAGGACGG GCTGGAGAAG ACGTTCGCGG TCAACTACCT GTCACACTTC
CTCCTCACCA ACCTGTTGCT CGACCGCCTG CGCGCGAGCC CCGCCGCGCG GGTGGTGAAC
GTCGCCTCCG ACGCCCACGC CCTCGGGAAG ATCGAGCTCG ACAACCTGCA GGGGGAGCGA
CACTACGAGC TGATGGACGC CTACGCCCGC TCGAAGCTCG CGGTCGTGAT GTTCACCTAC
GAGCTCTCGC GGCGGCTCGA GGGGACGCGC GTGACCGTCA ACGCCGTGCA CCCGGGCATC
GTCGCGACCA ACCTGGGCGA CGAGAACGGC TTCTTCCAGG GCTGGCTCCG CGTACGGATG
CGGAATCTCC TCAAGCGGTC GCTCCTGACC CCGGAGGAGG GAGCTCGCAA CATCGTGCGC
CTCGCGAGCG CGCCCGAGCT GGAGGGCGTC ACGGCCCGCT ACTTCGACCA GGACCGCGAG
GTCCGCTCCA CGCCGGCGTC GTACGACGCG GCGCTCGCGA AGCGGCTCTG GGAGGTGAGC
GAGGCGCTCT GTGCGTCCCG GCCGGCCGCG GGCGCCGGGT CCTCGCAGCG CGCGCAGCCC
GCCGCGACCG GCAGCGCGAC GGCCCGCTGA
 
Protein sequence
MDGPSEMGRR SFLEMAAAAA VAGVACRAEP GGRDREAGVS TRSRELAGKC CLVTGATSGM 
GAVTALELAR LGATVVVSGR SAESCASQAE AIRRETGARV ETAVADLGSL AQVRRMAAEV
ASRFERLDVL VNNAGTRLEQ RSVTEDGLEK TFAVNYLSHF LLTNLLLDRL RASPAARVVN
VASDAHALGK IELDNLQGER HYELMDAYAR SKLAVVMFTY ELSRRLEGTR VTVNAVHPGI
VATNLGDENG FFQGWLRVRM RNLLKRSLLT PEEGARNIVR LASAPELEGV TARYFDQDRE
VRSTPASYDA ALAKRLWEVS EALCASRPAA GAGSSQRAQP AATGSATAR