Gene Namu_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0625 
Symbol 
ID8446209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp688792 
End bp689772 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content69% 
IMG OID645039758 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003200029 
Protein GI258650873 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC GCGACCTCAT GGGCGGCAAG ACCGTGCTGG TCACCGGCGG CACCGGCGGG 
ATCGGGCTGG CCGCAGCCAC CGGTCTCGCC GGACTCCGCG CCCGCGTGGG GATCGTGGGC
CGCTCGGCCG CCCGAGGCGC GGCCGCGGCA GACGCCGTAC GAAGCAAGGT GCCCTCGGCG
CAGGTGGACG TCTTCGAGGC GGACCTGTCC GCCCAGTCCG AGGTACGGCG CCTGGCCGCT
GAGGTCAAGG CGACCTACTC GCGGCTGGAC GTGCTGGTGA ACAACGCAGG CGGCTACTGG
TCGCACCGTC ACGTCACCGC GGACGGCCTC GAGCACACCT TCGCGCTCAA CCACCTCGCC
CCATTCCTGC TCACCCACGA GCTGCACGAC CTGCTCGTCG CCAGCGCTCC CGCTCGGGTG
GTGACCGTGT CCTCGGGGGC GCAGGCCATG GGGCGGATCG ACTTCGACGA CCTTCAGGGC
GAGCGGTCCT ACAACGGCCA GCGTGCCTAC AACCAATCCA AACTCGCGAA CGTGCTGTTC
ACCTATGAGC TGGCCCGCCG GCTCGAAGGC ACCGGCGTGA CCGCGACCGT GCTGCACCCG
GGCGTGGTGC GCACCTCCTT CGGCCAGGAA GACAGCGATC GATGGATGCG GCTGGTGCTC
CCCCTGGTGA GGCCCTTCAT GAAGACCCCC GACCAGGGGG CCGCGACCCC GATTTACCTG
GCGAGCTCCC CCGAGGTCGA CGGCGTGAGC GGTGCCTACT TCGCCCACCA ACGGACGAAA
AAGTCGTCAA AGGGCCAGCT ACGACCGCGA CCTGGCCCAC CGGCTCTGGG AGGTCAGCAC
CTCGCTCGTG GGCATCCACC AGGCCAACAA CCCCGAGCAC GACGCCAAGG ATCAGACATG
AAGCTCGGGC GCCCACCTGG GAGGGTCACC GTGCAGCAGG TCAGCGGTCG ATCCGTCGAT
ATCTGTGCCC AGCTGACCTG A
 
Protein sequence
MNARDLMGGK TVLVTGGTGG IGLAAATGLA GLRARVGIVG RSAARGAAAA DAVRSKVPSA 
QVDVFEADLS AQSEVRRLAA EVKATYSRLD VLVNNAGGYW SHRHVTADGL EHTFALNHLA
PFLLTHELHD LLVASAPARV VTVSSGAQAM GRIDFDDLQG ERSYNGQRAY NQSKLANVLF
TYELARRLEG TGVTATVLHP GVVRTSFGQE DSDRWMRLVL PLVRPFMKTP DQGAATPIYL
ASSPEVDGVS GAYFAHQRTK KSSKGQLRPR PGPPALGGQH LARGHPPGQQ PRARRQGSDM
KLGRPPGRVT VQQVSGRSVD ICAQLT