| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3223 |
|---|
| Symbol | |
|---|
| ID | 8884422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3402911 |
|---|
| End bp | 3403807 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003511986 |
|---|
| Protein GI | 291300708 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.928112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00000218148 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAT TCAATGCGTC CAGCATCGGC TCCCAGGCGG GCCGCACCTT CGTCGTCACC
GGCGCCAACA GCGGCATCGG CCGCATCGCC GCCAAAGTCC TGGCCGAACG CGACGCCCGC
GTCGTGCTGG CCGTGCGCGA CGAGGCCAAA GGCCGCGCCG CCGCAGCGAC CATGACCGGC
CAGGTCGAGG TGAAGCGCCT CGATCTGGCC GACCTGGCGT CGGTGCGGGC CTTCGCCGAG
GACTTCACCG ACCCCATCGA CGTGCTCGTC AACAACGCCG GGGTCATGAT CCCGCCGCTG
ACGCGCACCG CCGACGGTTT CGAGCTGCAG TTCGGGACCA ACCACCTGGG GCACTTCGCG
TTGACGAACC TGCTGCTGCC CCAGGTGCGC GACCGGGTCG TGACCGTGGC GTCGATGGCT
CACCACGGCG GCGCCATCGA CTTCGACGAC CTCAACTGGC AACGCAAGCC CTACCGGGCG
ATGCGGGCCT ACGGGCAGTC CAAACTGGCC AACCTGCTGT TCACCACCGA GTTGCAGCGG
CGCCTGAGCC AGGCCGGTTC GTCGGTGATC GCCACCGCCG CGCACCCGGG TTTCGCGGCC
ACGAACCTGC TGCGGCCGGG ACGCAGCCGC CTGCTGCACA CCGTCTCAAA GGCGGTGACC
AGGGTTGTCG CGCAAAGCGA GGCTGCCGGT GCGCTGCCGA CGCTGTACGC GGCCGTGACC
GACGTACCCG GCGACAGCTA CGCCGGACCT AAGGGGCTGT TCGAAACCCG TGGCGCCCCG
AAGCTGGTGG GCCGGTCGGC GGCCGCCAAG GACGCCGAGG TGGCCAAGCG GTTGTGGGAG
GTGTCGCAGG AGCTGACGGC CGTGGTGTTC CCGCGCCAGT CGCTGCCCCG GGCCTGA
|
|---|
| Protein sequence | MTTFNASSIG SQAGRTFVVT GANSGIGRIA AKVLAERDAR VVLAVRDEAK GRAAAATMTG
QVEVKRLDLA DLASVRAFAE DFTDPIDVLV NNAGVMIPPL TRTADGFELQ FGTNHLGHFA
LTNLLLPQVR DRVVTVASMA HHGGAIDFDD LNWQRKPYRA MRAYGQSKLA NLLFTTELQR
RLSQAGSSVI ATAAHPGFAA TNLLRPGRSR LLHTVSKAVT RVVAQSEAAG ALPTLYAAVT
DVPGDSYAGP KGLFETRGAP KLVGRSAAAK DAEVAKRLWE VSQELTAVVF PRQSLPRA
|
|---|
| |