Gene Haur_5203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_5203 
Symbol 
ID5737161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009973 
Strand
Start bp291859 
End bp292728 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content57% 
IMG OID641282367 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001547958 
Protein GI159901712 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCGT CTCCTGCTTC CCGCATCATG CTCGTGACAG GAGCCAACAG TGGCTTAGGA 
CGCGCCACGG CGCTCGGCTT GGCATGCGAC GGTGCGACGG TGATTATGAT TTGTCGTGAT
GCAGCACTGG GGGCCGCCGC GCAAGCCGCC ATTATCCGCG AGAGTGGCAA TCCGGCGGTT
GATTTAATCA TCGCGGATTT ATCCTCACAG CATGCGATTC GACAGCTGGC CCAGACCGTG
CTCGCCCGCT ACCCGCAGCT GCATGGACTG ATTAATAATG TTGGAGCATC GTTTCCGACG
CGTCGCGTCA CGGTGGATGG CATCGAGTCT TCGCTGGCGA TCAATCACCT AGCGGCCTTT
TTACTCACCA ATCTCCTGTG TGATCGGCTC ATTGCGAGCG CCCCTGCTCG TATCATTAAC
GTTGGAACAC GGATTACAAC GCGGATGGAT TTCGATGATC TCCAGTTTGA AAAACGACCA
TATCGAGCCC TGGCGGCCTA TAGTCAGACG AAATTGGGCA CCATCCATTT TACCTATGAA
CTGGCTCGCC GCCTTGCGGG AACCGGAGTC ACGGTCAATT GCGTGCATCC CGGGGTTTTT
AAATCGCGTT TAGGCCAAGA CGACGGTCGT CAATCATGGT TTTTTCGGAT GCTTGGCCTC
CTTGGCCAGT ATGTCCTCCC TGATGCTGCC CAAGCCGCCA AACAGATAGT GTATCTCGCC
ACATCGCCAG CAGTTGCGGA CATCACGGGT TCCTATTTCG CCGCGATGCG CCCCATTTCA
TCACCACCAC AGACCTATGA TCGCGCGGCC AATGCCCGGC TCTGGGATCT GAGTGCGACC
TTAACCAAGC TCGACACCGA GGGGGAGTGA
 
Protein sequence
MSSSPASRIM LVTGANSGLG RATALGLACD GATVIMICRD AALGAAAQAA IIRESGNPAV 
DLIIADLSSQ HAIRQLAQTV LARYPQLHGL INNVGASFPT RRVTVDGIES SLAINHLAAF
LLTNLLCDRL IASAPARIIN VGTRITTRMD FDDLQFEKRP YRALAAYSQT KLGTIHFTYE
LARRLAGTGV TVNCVHPGVF KSRLGQDDGR QSWFFRMLGL LGQYVLPDAA QAAKQIVYLA
TSPAVADITG SYFAAMRPIS SPPQTYDRAA NARLWDLSAT LTKLDTEGE