Gene Mmcs_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_0596 
Symbol 
ID4109442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp656181 
End bp657101 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID638029722 
Productshort chain dehydrogenase 
Protein accessionYP_637773 
Protein GI108797576 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGA ACACCAAATG GACTGCGGCG GACGTGCCCG ACCAGGAAGG CCGTGTCGCC 
GTCATCACCG GCGCCAACAC GGGTATCGGT TACGAGGCGG CGGCGGTGCT GGCCGCCAAG
GGCGCCCACG TGGTGCTCGC GGTGCGCAAC ACCGACAAGG GCGGCGCCGC GGCCGAGCGC
ATCCGTTCTG CGCTGCCGCA TGCGGACGTG ACCGTGCGCG AACTCGACCT GACGTCGCTG
GACAGCATCC GCGAGGCCGC GGACGGGCTG CGCGCCGACT ATCCGCGGAT CGACCTGCTG
ATCAACAACG CGGGCGTGAT GATGACCGAG AAGGGCGCTA CCAAGGACGG TTTCGAGCTC
CAGCTCGGCA CCAACCACCT CGGCCACTTC GCGCTCACCG GCCAACTGCT CGACAACCTG
CTCCCCGTCG AGGGGTCGCG GGTGGTGACC GTCAGCAGCA ACGCCCACCG GTGGGGCCGC
GTGAACTTCG ACGATCTGCA GTCCGAGCGC AGCTACAACC GGGTCACCGC CTACGGGCAG
AGCAAGCTGG CCAACCTGCT GTTCACCTAT GAGCTCAACC GCCGACTGTC GGCGAAGGGT
GCGCCGACCA TCGCCGTCGC CGCCCATCCC GGGACATCGA GTACCGAGCT GACCCGCAAC
CTGTGGCCGG TGGCCCGCCG GCCCGTCGAA CTCGTCTGGG GACTTGTCGC GCAGACACCG
GAGATGGGTG CGTTGCCGAC ACTGCGGGCA GCCACCGACC CGGACGTGCG CGGCGGGCAG
TACTACGGCC CCGACGGCAT CGGGGAACAA CGCGGCCACC CGAAGCTCGT GCAGTCCAAC
GCCCGCTCGT ACGACGAGGC CGCACAGCGC CGGTTGTGGA GCGTGTCCGA GGAACTCACC
GGCGTCACGT TCCCCGTCTG A
 
Protein sequence
MSANTKWTAA DVPDQEGRVA VITGANTGIG YEAAAVLAAK GAHVVLAVRN TDKGGAAAER 
IRSALPHADV TVRELDLTSL DSIREAADGL RADYPRIDLL INNAGVMMTE KGATKDGFEL
QLGTNHLGHF ALTGQLLDNL LPVEGSRVVT VSSNAHRWGR VNFDDLQSER SYNRVTAYGQ
SKLANLLFTY ELNRRLSAKG APTIAVAAHP GTSSTELTRN LWPVARRPVE LVWGLVAQTP
EMGALPTLRA ATDPDVRGGQ YYGPDGIGEQ RGHPKLVQSN ARSYDEAAQR RLWSVSEELT
GVTFPV