More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_1632 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009428  Rsph17025_1632  methyl-accepting chemotaxis sensory transducer  100 
 
 
654 aa  1313    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0044  putative cytoplasmic chemoreceptor, TlpT  86.62 
 
 
567 aa  728    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0134213  n/a   
 
 
-
 
NC_009049  Rsph17029_1679  methyl-accepting chemotaxis sensory transducer  84.88 
 
 
567 aa  728    Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00756362  hitchhiker  0.00632021 
 
 
-
 
NC_010717  PXO_04751  chemotaxis protein  35.98 
 
 
698 aa  257  5e-67  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  33.86 
 
 
600 aa  244  3e-63  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_013216  Dtox_0613  methyl-accepting chemotaxis sensory transducer  33.8 
 
 
759 aa  238  3e-61  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.194714 
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  30.74 
 
 
619 aa  223  8e-57  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_009012  Cthe_3030  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
832 aa  214  2.9999999999999995e-54  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00284544  n/a   
 
 
-
 
NC_011898  Ccel_2313  methyl-accepting chemotaxis sensory transducer  43.37 
 
 
567 aa  213  1e-53  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1374  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
908 aa  209  1e-52  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1498  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
602 aa  206  1e-51  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2579  methyl-accepting chemotaxis sensory transducer  32.23 
 
 
905 aa  204  4e-51  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2483  methyl-accepting chemotaxis sensory transducer  32.23 
 
 
905 aa  204  5e-51  Anaeromyxobacter sp. K  Bacteria  normal  0.611307  n/a   
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  32.45 
 
 
752 aa  203  9.999999999999999e-51  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  31.95 
 
 
755 aa  196  8.000000000000001e-49  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  31.74 
 
 
733 aa  195  2e-48  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  31 
 
 
843 aa  193  1e-47  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0972  methyl-accepting chemotaxis protein (MCP)  43.93 
 
 
779 aa  192  1e-47  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000412028  n/a   
 
 
-
 
NC_007498  Pcar_1355  putative methyl-accepting chemotaxis protein (MCP)  47.22 
 
 
744 aa  192  1e-47  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2364  putative methyl-accepting chemotaxis protein (MCP)  42.95 
 
 
702 aa  193  1e-47  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  32.67 
 
 
774 aa  192  2e-47  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_009012  Cthe_0039  methyl-accepting chemotaxis sensory transducer  38.01 
 
 
623 aa  192  2e-47  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  32.94 
 
 
705 aa  191  5e-47  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_008346  Swol_1331  putative methyl-accepting chemotaxis sensory transducer  43.49 
 
 
370 aa  190  7e-47  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  30.32 
 
 
740 aa  187  4e-46  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  43.16 
 
 
740 aa  186  8e-46  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  30.75 
 
 
753 aa  185  3e-45  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1372  putative methyl-accepting chemotaxis protein (MCP)  37.61 
 
 
706 aa  184  4.0000000000000006e-45  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1768  methyl-accepting chemotaxis sensory transducer  42.91 
 
 
516 aa  182  1e-44  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  38.02 
 
 
578 aa  182  1e-44  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  41.36 
 
 
535 aa  182  2e-44  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  33.01 
 
 
706 aa  181  2.9999999999999997e-44  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  41.31 
 
 
527 aa  181  2.9999999999999997e-44  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  29.7 
 
 
745 aa  179  1e-43  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  29.17 
 
 
962 aa  179  1e-43  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1531  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.62 
 
 
1019 aa  179  2e-43  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.301691 
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  31.35 
 
 
691 aa  178  3e-43  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_007498  Pcar_2607  methyl-accepting chemotaxis protein (MCP)  43.4 
 
 
741 aa  177  4e-43  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0545  methyl-accepting chemotaxis protein (MCP)  46.9 
 
 
676 aa  177  5e-43  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  1.25556e-16  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  34.63 
 
 
596 aa  177  7e-43  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  40.67 
 
 
579 aa  175  1.9999999999999998e-42  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  37.62 
 
 
589 aa  175  1.9999999999999998e-42  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  43.4 
 
 
659 aa  175  1.9999999999999998e-42  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2967  methyl-accepting chemotaxis protein (MCP)  40.82 
 
 
695 aa  174  3.9999999999999995e-42  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000011738  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  42.08 
 
 
542 aa  174  5e-42  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  40.98 
 
 
583 aa  173  9e-42  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  29.03 
 
 
707 aa  173  1e-41  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_013512  Sdel_1991  chemotaxis sensory transducer  47.01 
 
 
661 aa  173  1e-41  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.21 
 
 
864 aa  171  3e-41  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  33.59 
 
 
775 aa  171  3e-41  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  40.27 
 
 
532 aa  171  3e-41  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  41.43 
 
 
618 aa  170  6e-41  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  42.15 
 
 
559 aa  169  1e-40  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  32.17 
 
 
678 aa  169  1e-40  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  38.65 
 
 
740 aa  169  1e-40  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_012560  Avin_51670  methyl accepting chemotaxis sensory transducer  47.98 
 
 
566 aa  168  2e-40  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2145  methyl-accepting chemotaxis protein  42.31 
 
 
781 aa  169  2e-40  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.297887  normal 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  39.5 
 
 
515 aa  168  2.9999999999999998e-40  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_012560  Avin_27960  methyl accepting chemotaxis sensory transducer  47.98 
 
 
575 aa  168  2.9999999999999998e-40  Azotobacter vinelandii DJ  Bacteria  normal  0.187216  n/a   
 
 
-
 
NC_010002  Daci_3477  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.94 
 
 
606 aa  168  2.9999999999999998e-40  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  39.33 
 
 
719 aa  168  2.9999999999999998e-40  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  39.26 
 
 
557 aa  167  4e-40  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  37.97 
 
 
584 aa  167  5.9999999999999996e-40  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  41.28 
 
 
545 aa  167  6.9999999999999995e-40  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
610 aa  167  6.9999999999999995e-40  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  35.69 
 
 
860 aa  167  6.9999999999999995e-40  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_010524  Lcho_1530  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.38 
 
 
890 aa  167  8e-40  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.155082 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  41.56 
 
 
586 aa  167  8e-40  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  42.02 
 
 
586 aa  166  1.0000000000000001e-39  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  41.56 
 
 
598 aa  166  1.0000000000000001e-39  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  38.97 
 
 
513 aa  165  2.0000000000000002e-39  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  33.05 
 
 
792 aa  165  2.0000000000000002e-39  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_007520  Tcr_0777  methyl-accepting chemotaxis sensory transducer  28.66 
 
 
712 aa  166  2.0000000000000002e-39  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.97 
 
 
513 aa  165  2.0000000000000002e-39  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  40.78 
 
 
642 aa  166  2.0000000000000002e-39  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_011145  AnaeK_3278  methyl-accepting chemotaxis sensory transducer  32.69 
 
 
880 aa  165  3e-39  Anaeromyxobacter sp. K  Bacteria  normal  0.0350486  n/a   
 
 
-
 
NC_010002  Daci_3767  methyl-accepting chemotaxis sensory transducer  37.84 
 
 
544 aa  164  4.0000000000000004e-39  Delftia acidovorans SPH-1  Bacteria  normal  0.155197  normal  0.170651 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  42.98 
 
 
592 aa  164  4.0000000000000004e-39  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  35.92 
 
 
589 aa  164  4.0000000000000004e-39  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_012560  Avin_27970  chemotaxis sensory transducer  47.47 
 
 
575 aa  164  4.0000000000000004e-39  Azotobacter vinelandii DJ  Bacteria  normal  0.0997024  n/a   
 
 
-
 
NC_007298  Daro_0729  PAS  35.65 
 
 
945 aa  164  6e-39  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.8 
 
 
566 aa  164  6e-39  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  40.14 
 
 
618 aa  164  7e-39  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  39.33 
 
 
548 aa  164  7e-39  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2086  methyl-accepting chemotaxis sensory transducer  34.48 
 
 
657 aa  163  8.000000000000001e-39  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  39.1 
 
 
578 aa  163  9e-39  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  41.7 
 
 
552 aa  163  9e-39  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
579 aa  163  9e-39  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  38.7 
 
 
668 aa  163  9e-39  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  42.62 
 
 
608 aa  162  1e-38  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  40 
 
 
547 aa  162  1e-38  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
NC_007005  Psyr_2682  histidine kinase, HAMP region: chemotaxis sensory transducer  38.41 
 
 
723 aa  163  1e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.121525  normal 
 
 
-
 
NC_010002  Daci_0742  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
581 aa  162  1e-38  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  41.28 
 
 
537 aa  163  1e-38  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_013421  Pecwa_2372  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
657 aa  162  1e-38  Pectobacterium wasabiae WPP163  Bacteria  normal  0.63052  n/a   
 
 
-
 
NC_011083  SeHA_C3400  methyl-accepting chemotaxis sensory transducer  40 
 
 
547 aa  163  1e-38  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.779493 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  42.62 
 
 
608 aa  162  1e-38  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  40 
 
 
547 aa  162  1e-38  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3406  methyl-accepting chemotaxis sensory transducer  40 
 
 
547 aa  162  1e-38  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  42.55 
 
 
653 aa  162  2e-38  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
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