More than 300 homologs were found in PanDaTox collection
for query gene Cpin_2357 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_2357  two component transcriptional regulator, LuxR family  100 
 
 		 234 aa  479  1e-134  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_1616  response regulator receiver  32.84 
 
 		 210 aa  116  3e-25  Pedobacter heparinus DSM 2366  Bacteria  normal  0.869432  normal  1 
 
 
-
 
NC_010571  Oter_0262  two component LuxR family transcriptional regulator  33.82 
 
 		 217 aa  115  6.9999999999999995e-25  Opitutus terrae PB90-1  Bacteria  normal  0.153662  normal  1 
 
 
-
 
NC_013037  Dfer_0722  two component transcriptional regulator, LuxR family  30.05 
 
 		 206 aa  110  2.0000000000000002e-23  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.511528  normal  0.608348 
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  30.14 
 
 		 210 aa  108  6e-23  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_4108  two component transcriptional regulator, LuxR family  30 
 
 		 210 aa  108  7.000000000000001e-23  Variovorax paradoxus S110  Bacteria  normal  0.755468  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  29.27 
 
 		 213 aa  107  1e-22  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_0881  two component LuxR family transcriptional regulator  30.81 
 
 		 210 aa  106  3e-22  Polaromonas sp. JS666  Bacteria  normal  0.464883  normal  0.594453 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  30.24 
 
 		 214 aa  105  5e-22  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_008752  Aave_3862  two component LuxR family transcriptional regulator  30.48 
 
 		 210 aa  105  8e-22  Acidovorax citrulli AAC00-1  Bacteria  normal  0.734244  normal  1 
 
 
-
 
NC_008786  Veis_0032  two component LuxR family transcriptional regulator  28.71 
 
 		 210 aa  105  8e-22  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.245451  normal  1 
 
 
-
 
NC_007404  Tbd_2237  two component LuxR family transcriptional regulator  29.06 
 
 		 211 aa  103  2e-21  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  29.19 
 
 		 210 aa  103  2e-21  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  31.34 
 
 		 211 aa  103  2e-21  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  27.88 
 
 		 215 aa  103  2e-21  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  29.19 
 
 		 239 aa  103  2e-21  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  30.87 
 
 		 224 aa  103  3e-21  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008781  Pnap_0922  two component LuxR family transcriptional regulator  30.33 
 
 		 210 aa  103  3e-21  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.114328  normal  1 
 
 
-
 
NC_008010  Dgeo_2846  two component LuxR family transcriptional regulator  30.77 
 
 		 209 aa  102  7e-21  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  30.85 
 
 		 233 aa  101  1e-20  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  32.75 
 
 		 244 aa  101  1e-20  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_3102  two component transcriptional regulator, LuxR family  31.31 
 
 		 222 aa  100  2e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.774177  normal  0.15342 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  34.78 
 
 		 215 aa  100  2e-20  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.43 
 
 		 215 aa  99.8  3e-20  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  30.84 
 
 		 210 aa  99.4  4e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  31.67 
 
 		 212 aa  99.4  4e-20  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_007498  Pcar_1400  two component signal transduction response regulator  29.35 
 
 		 214 aa  99.4  4e-20  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  31.05 
 
 		 225 aa  99.8  4e-20  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  32.91 
 
 		 228 aa  99.4  4e-20  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal  1 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  30.84 
 
 		 210 aa  99.4  5e-20  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_1851  two component LuxR family transcriptional regulator  29 
 
 		 262 aa  98.6  7e-20  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.467917  normal  0.53175 
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  30.84 
 
 		 210 aa  98.6  7e-20  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  30.39 
 
 		 213 aa  98.6  8e-20  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_013061  Phep_2962  response regulator receiver  32.51 
 
 		 206 aa  98.6  8e-20  Pedobacter heparinus DSM 2366  Bacteria  normal  0.117851  normal  1 
 
 
-
 
NC_012034  Athe_2627  two component transcriptional regulator, LuxR family  33.67 
 
 		 211 aa  97.8  1e-19  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_4502  two component transcriptional regulator, LuxR family  32.21 
 
 		 205 aa  97.4  1e-19  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.438194 
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  29.76 
 
 		 229 aa  97.8  1e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal  1 
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  31.65 
 
 		 228 aa  96.7  2e-19  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_013595  Sros_0074  response regulator receiver protein  28.37 
 
 		 207 aa  96.7  3e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  26.03 
 
 		 223 aa  96.7  3e-19  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  37.42 
 
 		 215 aa  96.7  3e-19  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_014148  Plim_0373  response regulator receiver  29.67 
 
 		 220 aa  96.3  4e-19  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  32 
 
 		 210 aa  95.9  4e-19  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_0978  two component signal transduction response regulator  29.35 
 
 		 223 aa  95.9  5e-19  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0402933  n/a   
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  28.71 
 
 		 210 aa  95.5  6e-19  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_012854  Rleg_6399  two component transcriptional regulator, LuxR family  31.16 
 
 		 214 aa  95.5  6e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.139442 
 
 
-
 
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  31.33 
 
 		 223 aa  95.5  7e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_014165  Tbis_3390  LuxR family two component transcriptional regulator  35.85 
 
 		 228 aa  95.1  8e-19  Thermobispora bispora DSM 43833  Bacteria  normal  0.269937  normal  1 
 
 
-
 
NC_007974  Rmet_5165  two component LuxR family transcriptional regulator  27.1 
 
 		 231 aa  95.1  9e-19  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.162111 
 
 
-
 
NC_011368  Rleg2_4527  two component transcriptional regulator, LuxR family  27.62 
 
 		 223 aa  94.4  1e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.658241 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  27.75 
 
 		 210 aa  94.7  1e-18  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_2743  two component LuxR family transcriptional regulator  34.46 
 
 		 215 aa  94.7  1e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.231043  normal  1 
 
 
-
 
NC_008699  Noca_3606  regulatory protein, LuxR  35.12 
 
 		 229 aa  94.4  1e-18  Nocardioides sp. JS614  Bacteria  normal  0.527821  n/a   
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  33.55 
 
 		 217 aa  94.4  2e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  36.88 
 
 		 218 aa  93.6  2e-18  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_013132  Cpin_4160  two component transcriptional regulator, LuxR family  33.33 
 
 		 215 aa  93.6  2e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0201669  normal  0.0925574 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  26.96 
 
 		 213 aa  93.6  2e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.0500394 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  28.18 
 
 		 221 aa  94.4  2e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal  1 
 
 
-
 
NC_008609  Ppro_3481  two component LuxR family transcriptional regulator  28.17 
 
 		 212 aa  94  2e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  0.016753  n/a   
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  31.71 
 
 		 214 aa  94  2e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_013739  Cwoe_0163  two component transcriptional regulator, LuxR family  30.2 
 
 		 213 aa  94  2e-18  Conexibacter woesei DSM 14684  Bacteria  normal  0.107009  normal  1 
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  29.67 
 
 		 213 aa  93.2  3e-18  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  30.5 
 
 		 217 aa  93.2  3e-18  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013595  Sros_3519  response regulator receiver protein  27.65 
 
 		 220 aa  93.6  3e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  29.67 
 
 		 213 aa  93.2  3e-18  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  27.19 
 
 		 228 aa  93.2  3e-18  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  28.08 
 
 		 219 aa  93.2  3e-18  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_009513  Lreu_0898  two component LuxR family transcriptional regulator  29.81 
 
 		 217 aa  93.2  3e-18  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000112877  n/a   
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  26.54 
 
 		 209 aa  93.2  3e-18  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  25.46 
 
 		 230 aa  92.8  4e-18  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  30.14 
 
 		 242 aa  92.8  4e-18  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  25.68 
 
 		 229 aa  92.4  5e-18  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  29.88 
 
 		 226 aa  92.4  5e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  28.71 
 
 		 214 aa  92.4  5e-18  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_013132  Cpin_4551  two component transcriptional regulator, LuxR family  31.44 
 
 		 208 aa  92.4  5e-18  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000124934  normal  0.0275678 
 
 
-
 
NC_008541  Arth_0485  two component LuxR family transcriptional regulator  30.41 
 
 		 208 aa  92.4  5e-18  Arthrobacter sp. FB24  Bacteria  normal  0.0855535  n/a   
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  29.95 
 
 		 218 aa  92.4  6e-18  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  32.12 
 
 		 217 aa  92.4  6e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  30.43 
 
 		 216 aa  92.4  6e-18  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  29.21 
 
 		 212 aa  92  7e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_007948  Bpro_2543  two component LuxR family transcriptional regulator  27.09 
 
 		 230 aa  92  7e-18  Polaromonas sp. JS666  Bacteria  normal  0.149636  normal  0.0443917 
 
 
-
 
NC_007951  Bxe_A1460  two component LuxR family transcriptional regulator  28.1 
 
 		 210 aa  92  7e-18  Burkholderia xenovorans LB400  Bacteria  normal  0.39219  normal  0.352919 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  31.45 
 
 		 216 aa  92  7e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0105  two component LuxR family transcriptional regulator  31.65 
 
 		 219 aa  91.7  9e-18  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.0920509 
 
 
-
 
NC_011145  AnaeK_2846  two component transcriptional regulator, LuxR family  33.33 
 
 		 215 aa  91.3  1e-17  Anaeromyxobacter sp. K  Bacteria  normal  0.243379  n/a   
 
 
-
 
NC_011992  Dtpsy_3068  two component transcriptional regulator, LuxR family  26.19 
 
 		 209 aa  91.3  1e-17  Acidovorax ebreus TPSY  Bacteria  normal  0.44153  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  30.93 
 
 		 211 aa  91.3  1e-17  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_2754  two component LuxR family transcriptional regulator  33.33 
 
 		 215 aa  91.7  1e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.221671  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  28.85 
 
 		 250 aa  91.3  1e-17  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_013510  Tcur_1651  two component transcriptional regulator, LuxR family  30.09 
 
 		 218 aa  90.9  1e-17  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000163278  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  28.86 
 
 		 219 aa  90.9  1e-17  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_011891  A2cp1_2938  two component transcriptional regulator, LuxR family  33.33 
 
 		 215 aa  91.3  1e-17  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  33.76 
 
 		 213 aa  91.3  1e-17  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_008782  Ajs_3794  two component LuxR family transcriptional regulator  26.19 
 
 		 209 aa  91.3  1e-17  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_0804  two component LuxR family transcriptional regulator  29.27 
 
 		 229 aa  91.3  1e-17  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  33.75 
 
 		 218 aa  90.9  2e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal  1 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  28.71 
 
 		 238 aa  90.9  2e-17  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  27.09 
 
 		 217 aa  90.5  2e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_009441  Fjoh_4735  two component LuxR family transcriptional regulator  31.55 
 
 		 209 aa  90.5  2e-17  Flavobacterium johnsoniae UW101  Bacteria  normal  0.545478  n/a   
 
 
-
 
NC_011992  Dtpsy_1772  two component transcriptional regulator, LuxR family  26.83 
 
 		 262 aa  90.5  2e-17  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
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