| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0922 |
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| Symbol | |
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| ID | 4689648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 972091 |
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| End bp | 972723 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639833920 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_981160 |
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| Protein GI | 121603831 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.114328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAA TTGGAATTGT GGATGACCAT GCCATTGTGC GTTCCGGACT GAAGCAGTTT
TTCTCGGACC AGGTGGATCT GCGCGTTGTT GGTGAAGCAG CAAGCGGACG GGAAGCGATT
GACCTGGTTC GCAATGTCGA ACTGGACATT CTTGTCATGG ATCTGTCCAT GCCGGGTCAA
AGTGGAATCG ATGCGCTGGC CATGATCCGC GCCAAGGCGC CCGATGTCGG CATCCTGATC
CTGAGCGGTT ACCCCGAAGA GCATTACGCA GTCAATCTGA TTCGTCAGGG TGCCAGCGGC
TACCTCAACA AGGAATGCGA CCCTTCTGAA ATCGTCGATG CCATTCGCGT GATTTCCCTG
GGCAAGCGCT ACATCACGGC AGCCGTGGCC GAGTTGCTTG CGCAGCAACT GAATCGTCCC
AAGGACGTGG CGGCCCACGA GCAGTTGTCC GAGCGGGAAT TCCAGGTGTT TCTGAAGCTG
GCCAAGGGTG AAACGGCAGG CGATATCGCC AAGGCGCTTT CGCTGAGCGT TAAAACCGTC
AGCACCTACC GCACGCGCGT CATGGAAAAG ATGAGTCTGG CCTCCAACAG CGACCTGACC
TATTACGCCC TGAAAAACAA ACTCATTGAC TGA
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| Protein sequence | MIKIGIVDDH AIVRSGLKQF FSDQVDLRVV GEAASGREAI DLVRNVELDI LVMDLSMPGQ
SGIDALAMIR AKAPDVGILI LSGYPEEHYA VNLIRQGASG YLNKECDPSE IVDAIRVISL
GKRYITAAVA ELLAQQLNRP KDVAAHEQLS EREFQVFLKL AKGETAGDIA KALSLSVKTV
STYRTRVMEK MSLASNSDLT YYALKNKLID
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