| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0262 |
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| Symbol | |
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| ID | 6205669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 289639 |
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| End bp | 290292 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689884 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001817152 |
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| Protein GI | 182412086 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.153662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGCTG CGCCGAATGT CGCCGTCGGG CTGGTCGAGG ACGATGCGCC TTACCGCGCC
TATGTGACGG CCCTGCTGGA GTCGACGGGT GAGCGGCGCG TGGCGTTTGC CGTTGGGTCC
GCGGAAGAAG GCTTGGCGCG CATCGCCGAG GCGCACGTGA ATGTGCTGTT GCTCGACCTG
CGGTTACCCG GAATTTCCGG AGGGGCGGCG GTGCAAAAAT TTCTGACCGT CCAGCCGGAC
CTTCTCGTGA TCATGCTAAC CGCGCTCGAT GCAGAGGAGC CCGTGATCGA ATCGATCAAG
TCAGGTGCGT GCGGCTATCT CTTGAAAGGG GCTTCGTCGG AAGCGGTGCT TGGCGCGGTC
GACGACGCGC TGGCCGGTGG CGCGCCGATG TCGCCATCGA TTGCCAGGCG CGTGCTCGGA
TTGCTGCGAG CGGCGCCAAC GACCATGGCG AAAGTGGCCG AGGGGAAACT CGCCGCGCTG
ACGGCCCGCG AGGAGGAAGT GCTCGCGCGC GTGGCCGCCG GGCGGAGCGA CAAAGAGATC
GCGGCGGAAT TTGGCACGGC GCTGTCGACG ATCAAAAACC ACCTGGCGAA CATCTATGCG
AAGTGGCGGG TGCGGTCGCG CACGGAGGCG GCGGTCAGGT TTCTCGGACG GTAG
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| Protein sequence | MKAAPNVAVG LVEDDAPYRA YVTALLESTG ERRVAFAVGS AEEGLARIAE AHVNVLLLDL
RLPGISGGAA VQKFLTVQPD LLVIMLTALD AEEPVIESIK SGACGYLLKG ASSEAVLGAV
DDALAGGAPM SPSIARRVLG LLRAAPTTMA KVAEGKLAAL TAREEEVLAR VAAGRSDKEI
AAEFGTALST IKNHLANIYA KWRVRSRTEA AVRFLGR
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