More than 300 homologs were found in PanDaTox collection
for query gene Rleg2_6421 on replicon NC_011371
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011371  Rleg2_6421  two component transcriptional regulator, LuxR family  100 
 
 		 251 aa  517  1e-146  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.872179  normal  1 
 
 
-
 
NC_012852  Rleg_6225  two component transcriptional regulator, LuxR family  79.51 
 
 		 258 aa  404  1e-111  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.173155 
 
 
-
 
NC_009620  Smed_4801  two component LuxR family transcriptional regulator  63.11 
 
 		 259 aa  303  2.0000000000000002e-81  Sinorhizobium medicae WSM419  Bacteria  normal  0.433912  normal  1 
 
 
-
 
NC_009620  Smed_4826  two component LuxR family transcriptional regulator  54.03 
 
 		 267 aa  255  6e-67  Sinorhizobium medicae WSM419  Bacteria  normal  0.847801  normal  0.0520322 
 
 
-
 
NC_004311  BRA0415  LuxR family transcriptional regulator  53.81 
 
 		 255 aa  243  3e-63  Brucella suis 1330  Bacteria  normal  0.272996  n/a   
 
 
-
 
NC_009504  BOV_A0358  LuxR family transcriptional regulator  53.81 
 
 		 255 aa  243  3e-63  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_009668  Oant_3368  two component LuxR family transcriptional regulator  52.38 
 
 		 258 aa  238  5e-62  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0298943  n/a   
 
 
-
 
NC_008254  Meso_2574  two component LuxR family transcriptional regulator  46.81 
 
 		 253 aa  214  9.999999999999999e-55  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_0957  LuxR family transcriptional regulator  40.81 
 
 		 342 aa  171  1e-41  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.553991  normal  0.407109 
 
 
-
 
NC_007964  Nham_2943  two component LuxR family transcriptional regulator  41.94 
 
 		 351 aa  171  1e-41  Nitrobacter hamburgensis X14  Bacteria  normal  0.692808  n/a   
 
 
-
 
NC_009049  Rsph17029_1961  response regulator receiver protein  41.2 
 
 		 247 aa  167  1e-40  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_0978  two component LuxR family transcriptional regulator  40.74 
 
 		 247 aa  166  4e-40  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.159022  normal  1 
 
 
-
 
NC_007493  RSP_0316  LuxR family transcriptional regulator  41.23 
 
 		 213 aa  162  4.0000000000000004e-39  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.155222  n/a   
 
 
-
 
NC_010505  Mrad2831_4608  two component LuxR family transcriptional regulator  38.81 
 
 		 275 aa  156  3e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.313635  normal  1 
 
 
-
 
NC_009667  Oant_0267  two component LuxR family transcriptional regulator  37.55 
 
 		 241 aa  154  1e-36  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_009050  Rsph17029_3701  two component LuxR family transcriptional regulator  33.61 
 
 		 253 aa  140  1.9999999999999998e-32  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.567008  normal  0.770716 
 
 
-
 
NC_009484  Acry_1738  response regulator receiver protein  35.75 
 
 		 267 aa  109  3e-23  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_009668  Oant_3972  two component LuxR family transcriptional regulator  28.76 
 
 		 251 aa  100  3e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.111106  n/a   
 
 
-
 
NC_011369  Rleg2_0250  two component transcriptional regulator, LuxR family  29.29 
 
 		 260 aa  95.9  6e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.664516  normal  1 
 
 
-
 
NC_012850  Rleg_0280  two component transcriptional regulator, LuxR family  35.29 
 
 		 245 aa  94  2e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.417338  normal  1 
 
 
-
 
NC_011989  Avi_0584  two component response regulator  31.19 
 
 		 215 aa  92  7e-18  Agrobacterium vitis S4  Bacteria  normal  0.566414  n/a   
 
 
-
 
NC_009636  Smed_0164  two component LuxR family transcriptional regulator  31.67 
 
 		 215 aa  92  9e-18  Sinorhizobium medicae WSM419  Bacteria  normal  0.523755  normal  1 
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  29.91 
 
 		 224 aa  90.1  3e-17  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009430  Rsph17025_4078  hypothetical protein  32.93 
 
 		 243 aa  90.1  3e-17  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0439982  normal  0.0668702 
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  31.02 
 
 		 224 aa  89  7e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  26.64 
 
 		 221 aa  87.4  2e-16  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  40.62 
 
 		 216 aa  87.4  2e-16  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  36.23 
 
 		 218 aa  84.7  0.000000000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  36.71 
 
 		 224 aa  84.3  0.000000000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_0408  two component LuxR family transcriptional regulator  31.08 
 
 		 214 aa  81.6  0.00000000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.82136  n/a   
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  36.05 
 
 		 220 aa  81.3  0.00000000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  34.72 
 
 		 227 aa  80.5  0.00000000000003  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  31.22 
 
 		 232 aa  79.7  0.00000000000004  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  32.17 
 
 		 220 aa  79.3  0.00000000000005  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  32.17 
 
 		 220 aa  79.3  0.00000000000005  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  36.96 
 
 		 221 aa  79.3  0.00000000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1151  two-component response regulator  28.99 
 
 		 248 aa  79  0.00000000000006  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_3170  two component transcriptional regulator, LuxR family protein  30.05 
 
 		 227 aa  79  0.00000000000006  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  32.17 
 
 		 220 aa  79.3  0.00000000000006  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  32.17 
 
 		 220 aa  79  0.00000000000007  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  34.04 
 
 		 218 aa  79  0.00000000000008  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_008347  Mmar10_2744  two component LuxR family transcriptional regulator  33.33 
 
 		 201 aa  78.6  0.00000000000008  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  32.17 
 
 		 219 aa  77.8  0.0000000000001  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal  1 
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  32.17 
 
 		 238 aa  77.8  0.0000000000002  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_0179  LuxR family DNA-binding response regulator  32.35 
 
 		 219 aa  77.4  0.0000000000002  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_1627  two component LuxR family transcriptional regulator  30.82 
 
 		 244 aa  77.8  0.0000000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0484719  n/a   
 
 
-
 
NC_009654  Mmwyl1_3005  two component LuxR family transcriptional regulator  32.85 
 
 		 217 aa  77.4  0.0000000000002  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00815247  normal  1 
 
 
-
 
NC_011369  Rleg2_0190  two component transcriptional regulator, LuxR family  34.72 
 
 		 215 aa  77.4  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_0219  two component transcriptional regulator, LuxR family  34.72 
 
 		 215 aa  77  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.463895 
 
 
-
 
NC_010172  Mext_4220  response regulator receiver  27.8 
 
 		 244 aa  76.6  0.0000000000003  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.89842 
 
 
-
 
NC_011757  Mchl_4590  two component transcriptional regulator, LuxR family  27.8 
 
 		 244 aa  76.6  0.0000000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.590508  normal  0.147521 
 
 
-
 
NC_010725  Mpop_4737  two component transcriptional regulator, LuxR family  27.85 
 
 		 241 aa  76.6  0.0000000000003  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.0133592 
 
 
-
 
NC_007643  Rru_A2232  two component LuxR family transcriptional regulator  30.48 
 
 		 212 aa  76.6  0.0000000000004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  36.51 
 
 		 214 aa  76.3  0.0000000000004  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  32.17 
 
 		 219 aa  76.3  0.0000000000005  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_010511  M446_2941  two component LuxR family transcriptional regulator  29.79 
 
 		 251 aa  75.9  0.0000000000005  Methylobacterium sp. 4-46  Bacteria  normal  0.80826  normal  0.0563961 
 
 
-
 
NC_011894  Mnod_4192  two component transcriptional regulator, LuxR family  29.79 
 
 		 251 aa  75.9  0.0000000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.270399  n/a   
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  30.77 
 
 		 220 aa  75.9  0.0000000000006  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  35.51 
 
 		 221 aa  75.5  0.0000000000007  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  31.43 
 
 		 220 aa  75.5  0.0000000000007  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  27.86 
 
 		 209 aa  75.5  0.0000000000008  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013169  Ksed_04030  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.25 
 
 		 223 aa  75.5  0.0000000000008  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.253855  normal  0.0592312 
 
 
-
 
NC_009901  Spea_0829  two component LuxR family transcriptional regulator  25.36 
 
 		 209 aa  75.5  0.0000000000008  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00236991  n/a   
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  30.07 
 
 		 220 aa  75.1  0.000000000001  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  30.07 
 
 		 220 aa  74.7  0.000000000001  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  32.47 
 
 		 224 aa  75.1  0.000000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  30.07 
 
 		 220 aa  75.1  0.000000000001  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  30.07 
 
 		 220 aa  75.1  0.000000000001  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_010505  Mrad2831_2408  two component LuxR family transcriptional regulator  32.12 
 
 		 219 aa  73.9  0.000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0426941  normal  0.882432 
 
 
-
 
NC_008345  Sfri_0620  two component transcriptional regulator, LuxR family protein  25.23 
 
 		 209 aa  74.3  0.000000000002  Shewanella frigidimarina NCIMB 400  Bacteria  unclonable  0.000000000275655  n/a   
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  35.48 
 
 		 210 aa  73.9  0.000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  28.85 
 
 		 210 aa  73.6  0.000000000003  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_2173  two component LuxR family transcriptional regulator  31.03 
 
 		 221 aa  73.6  0.000000000003  Pseudomonas putida F1  Bacteria  normal  0.548338  normal  1 
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  31.79 
 
 		 227 aa  73.6  0.000000000003  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009092  Shew_0842  two component LuxR family transcriptional regulator  24.88 
 
 		 209 aa  73.2  0.000000000003  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00000336278  normal  1 
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  24.19 
 
 		 211 aa  73.6  0.000000000003  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  27.44 
 
 		 216 aa  73.6  0.000000000003  Pseudomonas putida W619  Bacteria  normal  1  hitchhiker  0.00000136895 
 
 
-
 
NC_002947  PP_2665  LuxR family two component transcriptional regulator  31.76 
 
 		 221 aa  73.2  0.000000000004  Pseudomonas putida KT2440  Bacteria  normal  0.107491  normal  1 
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  32.35 
 
 		 219 aa  73.2  0.000000000004  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_010322  PputGB1_3138  two component LuxR family transcriptional regulator  31.76 
 
 		 221 aa  73.2  0.000000000004  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.892266 
 
 
-
 
NC_008463  PA14_38930  putative transcriptional regulator  31.08 
 
 		 221 aa  73.2  0.000000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_0929  two component LuxR family transcriptional regulator  24.06 
 
 		 209 aa  72  0.000000000009  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000567962  normal  1 
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  27.78 
 
 		 216 aa  72  0.000000000009  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.192356 
 
 
-
 
NC_010577  XfasM23_0261  two component LuxR family transcriptional regulator  28.1 
 
 		 210 aa  72  0.000000000009  Xylella fastidiosa M23  Bacteria  normal  0.574059  n/a   
 
 
-
 
NC_008322  Shewmr7_0664  two component LuxR family transcriptional regulator  33.33 
 
 		 223 aa  72  0.000000000009  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.358413 
 
 
-
 
NC_003910  CPS_0937  LuxR family DNA-binding response regulator  27.83 
 
 		 223 aa  71.2  0.00000000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.715087  n/a   
 
 
-
 
NC_008709  Ping_2536  two component transcriptional regulator, LuxR family protein  34.03 
 
 		 216 aa  71.6  0.00000000001  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004310  BR0315  LuxR family DNA-binding response regulator  33.83 
 
 		 213 aa  71.2  0.00000000001  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  27.94 
 
 		 217 aa  71.2  0.00000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_009783  VIBHAR_00157  transcriptional regulator LuxR  27.98 
 
 		 211 aa  71.2  0.00000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_1943  two component LuxR family transcriptional regulator  29.93 
 
 		 221 aa  71.2  0.00000000001  Pseudomonas mendocina ymp  Bacteria  normal  0.550145  normal  1 
 
 
-
 
NC_009656  PSPA7_3317  putative transcriptional regulator  29.25 
 
 		 221 aa  71.2  0.00000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_3283  two component LuxR family transcriptional regulator  33.33 
 
 		 223 aa  72  0.00000000001  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.335218 
 
 
-
 
NC_008577  Shewana3_3459  two component LuxR family transcriptional regulator  33.33 
 
 		 223 aa  71.6  0.00000000001  Shewanella sp. ANA-3  Bacteria  normal  0.306063  normal  0.532773 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  32.52 
 
 		 221 aa  70.9  0.00000000002  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_010524  Lcho_1299  two component LuxR family transcriptional regulator  28.35 
 
 		 273 aa  70.5  0.00000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0170327 
 
 
-
 
NC_009505  BOV_0331  LuxR family DNA-binding response regulator  33.85 
 
 		 213 aa  71.2  0.00000000002  Brucella ovis ATCC 25840  Bacteria  normal  0.338839  n/a   
 
 
-
 
NC_007974  Rmet_4854  putative two component LuxR family transcriptional regulator  28.64 
 
 		 211 aa  71.2  0.00000000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.133138  normal  0.31096 
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  30.77 
 
 		 219 aa  70.9  0.00000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.001499 
 
 
-
 
NC_008700  Sama_0522  response regulator receiver protein  33.08 
 
 		 223 aa  70.5  0.00000000002  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.211294 
 
 
-
 
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