| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1627 |
|---|
| Symbol | |
|---|
| ID | 3918735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1701688 |
|---|
| End bp | 1702422 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640444367 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_496901 |
|---|
| Protein GI | 87199644 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0484719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATC TTTCGTCGGA AACGTCTGTC TTTCTGCTCG GCCGTAACAG CATCGGCCGC
GAAGGGCTTC GCCTCCTGCT CGAAGGGGGC AGTTTCAGAG TTGCCGTGTC TCAGGAGGAG
TACTCCGTTT CCTCCGATTG GCCACGGGAC TTGGCAGGTC CGCACCTTAT CGTGCTGGAT
ACCGGCAAGG GCGACCAACT CGATCTCCAG GCGATGTTCA AGGGCTACAA GGCATCCTAT
CCGCAGGCTC GCCTTGTGAT CCTCGCCGAA AGCTTCGAGT TCGAAGGCGT GATGCGCGCG
TTCGCCGCCG GTGCCGATGG CTACATCGTC AAGGAGATCG GCTGCCAGTC CCTCATGGAA
TCGCTTCGCC TCATCGCCCT TGGTGAAAAG GTCATGCCAA GCGCGCTCGC GCAGTTCCTT
CCCGAAACAA TGGAACGTCG CACGCGTCCT GCCCGTCCCG GCCCGGACCT GGCCGGCACC
CTCTCCGAGC GCGAAATCGA GACATTCCGT CGCATGTGCC GAGGCGAACC TAACAAGGTC
ATCGCCCAGA ACCTTGGCAT AACCGAGGCG ACCGTGAAGG TTCACGTCAA GGCGATCCTG
CGCAAGCTGC ATCTAAAGAA CCGTACGCAG GCCGTTGCCT GGGCCTTGGG CGAAGGGGCC
GACTTCGGCG GTCCTGACCG CCGCCGTTCT GCAGCCGGCC ATTCCAGCAC CACGCCTGGT
GCCATCGCCG CCTGA
|
|---|
| Protein sequence | MSNLSSETSV FLLGRNSIGR EGLRLLLEGG SFRVAVSQEE YSVSSDWPRD LAGPHLIVLD
TGKGDQLDLQ AMFKGYKASY PQARLVILAE SFEFEGVMRA FAAGADGYIV KEIGCQSLME
SLRLIALGEK VMPSALAQFL PETMERRTRP ARPGPDLAGT LSEREIETFR RMCRGEPNKV
IAQNLGITEA TVKVHVKAIL RKLHLKNRTQ AVAWALGEGA DFGGPDRRRS AAGHSSTTPG
AIAA
|
|---|
| |