More than 300 homologs were found in PanDaTox collection
for query gene PA14_25480 on replicon NC_008463
Organism: Pseudomonas aeruginosa UCBPP-PA14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_1897  DNA internalization-related competence protein ComEC/Rec2  57.49 
 
 
737 aa  679    Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.000116946 
 
 
-
 
NC_010501  PputW619_1508  DNA internalization-related competence protein ComEC/Rec2  56.83 
 
 
737 aa  660    Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1611  DNA internalization-related competence protein ComEC/Rec2  61.91 
 
 
741 aa  692    Pseudomonas mendocina ymp  Bacteria  normal  0.804409  normal  0.12587 
 
 
-
 
NC_004578  PSPTO_3848  DNA internalization-related competence protein ComEC/Rec2  57.22 
 
 
738 aa  692    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3817  DNA internalization-related competence protein ComEC/Rec2  57.7 
 
 
738 aa  679    Pseudomonas putida F1  Bacteria  normal  0.925349  normal 
 
 
-
 
NC_009656  PSPA7_2177  DNA internalization-related competence protein ComEC/Rec2  83.64 
 
 
740 aa  1042    Pseudomonas aeruginosa PA7  Bacteria  normal  0.589266  n/a   
 
 
-
 
NC_012560  Avin_14730  DNA internalization-related competence protein ComA  60.2 
 
 
711 aa  656    Azotobacter vinelandii DJ  Bacteria  normal  0.0603479  n/a   
 
 
-
 
NC_007005  Psyr_1632  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  56.92 
 
 
738 aa  673    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_007492  Pfl01_4178  DNA internalization-like competence protein ComEC/Rec2  56.95 
 
 
747 aa  714    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.145225  normal  0.646667 
 
 
-
 
NC_010322  PputGB1_1473  DNA internalization-related competence protein ComEC/Rec2  58.11 
 
 
738 aa  658    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_25480  putative competence protein  100 
 
 
741 aa  1397    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA2627  DNA internalization-related competence protein ComEC/Rec2  39.09 
 
 
801 aa  376  1e-103  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2672  DNA internalization-related competence protein ComEC/Rec2  37.45 
 
 
784 aa  361  2e-98  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2506  DNA internalization-related competence protein ComEC/Rec2  36.68 
 
 
766 aa  359  9.999999999999999e-98  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2093  DNA internalization-related competence protein ComEC/Rec2  35.07 
 
 
802 aa  343  5e-93  Methylobacillus flagellatus KT  Bacteria  normal  0.35183  normal 
 
 
-
 
NC_007298  Daro_2832  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  37.1 
 
 
772 aa  332  1e-89  Dechloromonas aromatica RCB  Bacteria  normal  0.395271  normal 
 
 
-
 
NC_011901  Tgr7_1368  DNA internalization-related competence protein ComEC/Rec2  39.97 
 
 
770 aa  318  2e-85  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0963  DNA internalization-related competence protein ComEC/Rec2  35.11 
 
 
840 aa  317  6e-85  Ralstonia pickettii 12J  Bacteria  normal  0.116554  normal  0.0504124 
 
 
-
 
NC_010513  Xfasm12_0386  DNA uptake protein  37.53 
 
 
825 aa  317  7e-85  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1059  DNA internalization-related competence protein ComEC/Rec2  35.36 
 
 
839 aa  315  2.9999999999999996e-84  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010577  XfasM23_0350  DNA internalization-related competence protein ComEC/Rec2  37.1 
 
 
822 aa  310  5e-83  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1759  DNA internalization-related competence protein ComEC/Rec2  37.47 
 
 
778 aa  310  6.999999999999999e-83  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_1429  DNA internalization-related competence protein ComEC/Rec2  36.42 
 
 
840 aa  308  3e-82  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3404  DNA internalization-related competence protein ComEC/Rec2  37.43 
 
 
747 aa  299  1e-79  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1702  DNA internalization-related competence protein ComEC/Rec2  32.29 
 
 
839 aa  297  5e-79  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0283023 
 
 
-
 
NC_011662  Tmz1t_1990  DNA internalization-related competence protein ComEC/Rec2  39.08 
 
 
835 aa  295  3e-78  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00591  DNA internalization-related competence protein ComEC/Rec2  38.54 
 
 
776 aa  294  4e-78  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0903265  n/a   
 
 
-
 
NC_009379  Pnuc_1465  DNA internalization-related competence protein ComEC/Rec2  31.7 
 
 
801 aa  293  8e-78  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0403  DNA internalization-related competence protein ComEC/Rec2  36.47 
 
 
878 aa  292  1e-77  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105029 
 
 
-
 
NC_003295  RSc1120  putative transporter DNA uptake transmembrane protein  35.61 
 
 
847 aa  289  1e-76  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0978754  normal  0.511509 
 
 
-
 
NC_007908  Rfer_2476  DNA internalization-related competence protein ComEC/Rec2  36.45 
 
 
766 aa  280  6e-74  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1079  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  35.32 
 
 
800 aa  280  7e-74  Ralstonia eutropha JMP134  Bacteria  normal  0.723493  n/a   
 
 
-
 
NC_010681  Bphyt_2564  DNA internalization-related competence protein ComEC/Rec2  34.86 
 
 
929 aa  280  7e-74  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0267783  normal  0.0941772 
 
 
-
 
NC_010524  Lcho_2608  DNA internalization-related competence protein ComEC/Rec2  37.27 
 
 
833 aa  278  3e-73  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008781  Pnap_1205  DNA internalization-related competence protein ComEC/Rec2  35.89 
 
 
845 aa  277  6e-73  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.285892 
 
 
-
 
NC_007973  Rmet_1043  DNA internalization-related competence protein ComEC/Rec2  34.02 
 
 
851 aa  277  6e-73  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.605949 
 
 
-
 
NC_010084  Bmul_1159  DNA internalization-related competence protein ComEC/Rec2  36.07 
 
 
819 aa  276  1.0000000000000001e-72  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00785752 
 
 
-
 
NC_006368  lpp0680  hypothetical protein  30.52 
 
 
735 aa  274  4.0000000000000004e-72  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_1818  DNA internalization-related competence protein ComEC/Rec2  31.66 
 
 
765 aa  274  5.000000000000001e-72  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0856288  normal  0.218544 
 
 
-
 
NC_006369  lpl0663  hypothetical protein  31.08 
 
 
735 aa  272  1e-71  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010508  Bcenmc03_2129  DNA internalization-related competence protein ComEC/Rec2  34.96 
 
 
829 aa  271  4e-71  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.326593  normal  0.0900672 
 
 
-
 
NC_008062  Bcen_5966  DNA internalization-related competence protein ComEC/Rec2  34.13 
 
 
829 aa  267  4e-70  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.814009  n/a   
 
 
-
 
NC_008542  Bcen2424_2111  DNA internalization-related competence protein ComEC/Rec2  34.13 
 
 
829 aa  267  4e-70  Burkholderia cenocepacia HI2424  Bacteria  normal  0.261797  n/a   
 
 
-
 
NC_008825  Mpe_A2554  putative transporter DNA uptake transmembrane protein  38.64 
 
 
846 aa  264  4.999999999999999e-69  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1569  ComEC/Rec2-related protein  33.46 
 
 
801 aa  263  6e-69  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.304315 
 
 
-
 
NC_010002  Daci_5080  DNA internalization-related competence protein ComEC/Rec2  37.62 
 
 
832 aa  261  4e-68  Delftia acidovorans SPH-1  Bacteria  normal  0.411729  normal  0.0251813 
 
 
-
 
NC_007434  BURPS1710b_2715  DNA internalization-related competence protein ComEC/Rec2  34.95 
 
 
842 aa  259  8e-68  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA1693  DNA internalization-related competence protein ComEC/Rec2  34.82 
 
 
842 aa  258  2e-67  Burkholderia mallei ATCC 23344  Bacteria  normal  0.891985  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2198  DNA internalization-related competence protein ComEC/Rec2  34.82 
 
 
856 aa  258  2e-67  Burkholderia mallei SAVP1  Bacteria  normal  0.975554  n/a   
 
 
-
 
NC_009074  BURPS668_2581  DNA internalization-related competence protein ComEC/Rec2  34.82 
 
 
856 aa  258  2e-67  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3120  DNA internalization-related competence protein ComEC/Rec2  34.82 
 
 
856 aa  258  2e-67  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1471  DNA internalization-related competence protein ComEC/Rec2  34.82 
 
 
856 aa  258  2e-67  Burkholderia mallei NCTC 10247  Bacteria  normal  0.300879  n/a   
 
 
-
 
NC_009076  BURPS1106A_2636  DNA internalization-related competence protein ComEC/Rec2  34.82 
 
 
856 aa  258  3e-67  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0667077  n/a   
 
 
-
 
NC_009901  Spea_1769  DNA internalization-related competence protein ComEC/Rec2  29.54 
 
 
812 aa  258  3e-67  Shewanella pealeana ATCC 700345  Bacteria  normal  0.479237  n/a   
 
 
-
 
NC_011992  Dtpsy_0933  DNA internalization-related competence protein ComEC/Rec2  38.52 
 
 
861 aa  258  3e-67  Acidovorax ebreus TPSY  Bacteria  normal  0.337545  n/a   
 
 
-
 
NC_007948  Bpro_3158  DNA internalization-related competence protein ComEC/Rec2  34.2 
 
 
860 aa  256  9e-67  Polaromonas sp. JS666  Bacteria  normal  0.0990853  normal  0.446106 
 
 
-
 
NC_011071  Smal_1395  DNA internalization-related competence protein ComEC/Rec2  34.89 
 
 
799 aa  254  4.0000000000000004e-66  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.751306  normal 
 
 
-
 
NC_007510  Bcep18194_A5417  DNA internalization-related competence protein ComEC/Rec2  33.73 
 
 
830 aa  253  7e-66  Burkholderia sp. 383  Bacteria  normal  0.560238  normal 
 
 
-
 
NC_007520  Tcr_0957  DNA internalization-related competence protein ComEC/Rec2  29.54 
 
 
841 aa  253  9.000000000000001e-66  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2021  DNA internalization-related competence protein ComEC/Rec2  33.96 
 
 
833 aa  252  2e-65  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.130557 
 
 
-
 
NC_008390  Bamb_2148  DNA internalization-related competence protein ComEC/Rec2  34.21 
 
 
829 aa  252  2e-65  Burkholderia ambifaria AMMD  Bacteria  normal  0.705314  n/a   
 
 
-
 
NC_008228  Patl_1779  DNA internalization-related competence protein ComEC/Rec2  30.51 
 
 
762 aa  250  6e-65  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1637  DNA internalization-related competence protein ComEC/Rec2  32.34 
 
 
761 aa  249  1e-64  Shewanella loihica PV-4  Bacteria  normal  0.594703  normal 
 
 
-
 
NC_009665  Shew185_1667  DNA internalization-related competence protein ComEC/Rec2  30.55 
 
 
795 aa  246  9e-64  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1585  DNA internalization-related competence protein ComEC/Rec2  36.24 
 
 
758 aa  246  9.999999999999999e-64  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.882312  n/a   
 
 
-
 
NC_003910  CPS_2124  DNA internalization-related competence protein ComEC/Rec2  29.35 
 
 
860 aa  246  1.9999999999999999e-63  Colwellia psychrerythraea 34H  Bacteria  normal  0.118158  n/a   
 
 
-
 
NC_008752  Aave_1352  DNA internalization-related competence protein ComEC/Rec2  37.54 
 
 
948 aa  245  1.9999999999999999e-63  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0141053 
 
 
-
 
NC_010622  Bphy_1443  DNA internalization-related competence protein ComEC/Rec2  33.2 
 
 
843 aa  244  3e-63  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1704  DNA internalization-related competence protein ComEC/Rec2  30.94 
 
 
783 aa  244  3.9999999999999997e-63  Shewanella baltica OS195  Bacteria  normal  0.0286912  normal 
 
 
-
 
NC_008321  Shewmr4_2423  DNA internalization-related competence protein ComEC/Rec2  29.77 
 
 
773 aa  241  5e-62  Shewanella sp. MR-4  Bacteria  normal  normal  0.395966 
 
 
-
 
NC_008577  Shewana3_2585  DNA internalization-related competence protein ComEC/Rec2  30.35 
 
 
773 aa  240  9e-62  Shewanella sp. ANA-3  Bacteria  normal  normal  0.13038 
 
 
-
 
NC_008322  Shewmr7_2493  DNA internalization-related competence protein ComEC/Rec2  29.76 
 
 
773 aa  238  3e-61  Shewanella sp. MR-7  Bacteria  normal  0.105792  normal  0.137051 
 
 
-
 
NC_009052  Sbal_1682  DNA internalization-related competence protein ComEC/Rec2  30.5 
 
 
783 aa  238  4e-61  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2675  DNA internalization-related competence protein ComEC/Rec2  30.45 
 
 
783 aa  236  9e-61  Shewanella baltica OS223  Bacteria  normal  0.923098  normal  0.0587505 
 
 
-
 
NC_009438  Sputcn32_1556  DNA internalization-related competence protein ComEC/Rec2  28.35 
 
 
774 aa  236  1.0000000000000001e-60  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2827  DNA internalization-related competence protein ComEC/Rec2  30.86 
 
 
767 aa  236  1.0000000000000001e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0829289 
 
 
-
 
NC_012880  Dd703_2209  hypothetical protein  33.2 
 
 
747 aa  224  3e-57  Dickeya dadantii Ech703  Bacteria  normal  0.785174  n/a   
 
 
-
 
NC_009457  VC0395_A1470  ComEC/rec2 family protein  30.74 
 
 
752 aa  223  8e-57  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2803  DNA internalization-related competence protein ComEC/Rec2  30.04 
 
 
769 aa  220  8.999999999999998e-56  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_1336  DNA internalization-related competence protein ComEC/Rec2  31.73 
 
 
765 aa  219  1e-55  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.62013 
 
 
-
 
NC_008709  Ping_0899  DNA internalization-related competence protein ComEC/Rec2  28.79 
 
 
798 aa  214  4.9999999999999996e-54  Psychromonas ingrahamii 37  Bacteria  normal  0.383263  normal  0.740662 
 
 
-
 
NC_012917  PC1_1768  hypothetical protein  30.75 
 
 
763 aa  203  9.999999999999999e-51  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.44185  n/a   
 
 
-
 
NC_013421  Pecwa_2040  hypothetical protein  29.36 
 
 
763 aa  199  2.0000000000000003e-49  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1711  hypothetical protein  32.15 
 
 
737 aa  194  4e-48  Serratia proteamaculans 568  Bacteria  normal  0.0805358  normal 
 
 
-
 
NC_011313  VSAL_II0736  putative competence-related protein  29.34 
 
 
768 aa  194  7e-48  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2310  hypothetical protein  30.93 
 
 
793 aa  189  2e-46  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01534  hypothetical protein  28.57 
 
 
752 aa  189  2e-46  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008309  HS_1022  recombination protein 2  27.13 
 
 
808 aa  188  4e-46  Haemophilus somnus 129PT  Bacteria  normal  0.949854  n/a   
 
 
-
 
NC_013456  VEA_003988  predicted hydrolase of the metallo-beta-lactamase superfamily  30.4 
 
 
752 aa  184  7e-45  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1202  DNA internalization-related competence protein ComEC/Rec2  32.8 
 
 
776 aa  184  8.000000000000001e-45  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.177641 
 
 
-
 
NC_007651  BTH_I1890  DNA internalization-related competence protein ComEC/Rec2  37.8 
 
 
845 aa  180  7e-44  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2578  hypothetical protein  29.47 
 
 
763 aa  179  1e-43  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0251432  n/a   
 
 
-
 
NC_009801  EcE24377A_1011  hypothetical protein  27.3 
 
 
754 aa  179  2e-43  Escherichia coli E24377A  Bacteria  hitchhiker  0.00460048  n/a   
 
 
-
 
NC_010465  YPK_2666  hypothetical protein  29.47 
 
 
763 aa  178  3e-43  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1958  hypothetical protein  29.34 
 
 
763 aa  177  7e-43  Yersinia pestis Angola  Bacteria  hitchhiker  0.0001218  normal  0.195131 
 
 
-
 
NC_009674  Bcer98_3051  DNA internalization-related competence protein ComEC/Rec2  24.58 
 
 
780 aa  176  1.9999999999999998e-42  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.755952  n/a   
 
 
-
 
NC_009436  Ent638_1432  hypothetical protein  29.55 
 
 
754 aa  174  3.9999999999999995e-42  Enterobacter sp. 638  Bacteria  normal  0.0687894  normal 
 
 
-
 
NC_011094  SeSA_A1097  hypothetical protein  29.45 
 
 
756 aa  174  6.999999999999999e-42  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_2207  hypothetical protein  27.16 
 
 
754 aa  173  9e-42  Escherichia coli SMS-3-5  Bacteria  normal  0.01066  normal  0.239269 
 
 
-
 
CP001637  EcDH1_2730  DNA internalization-related competence protein ComEC/Rec2  27.3 
 
 
754 aa  173  1e-41  Escherichia coli DH1  Bacteria  normal  0.170872  n/a   
 
 
-
 
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