More than 300 homologs were found in PanDaTox collection
for query gene Gura_0738 on replicon NC_009483
Organism: Geobacter uraniireducens Rf4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009483  Gura_0738  response regulator receiver protein  100 
 
 
227 aa  453  1e-127  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000561574  n/a   
 
 
-
 
NC_002939  GSU2506  sensory box protein/sigma-54 dependent DNA-binding response regulator  45.1 
 
 
564 aa  129  3e-29  Geobacter sulfurreducens PCA  Bacteria  normal  0.92979  n/a   
 
 
-
 
NC_007498  Pcar_2365  two component signal transduction response regulator  44.3 
 
 
575 aa  120  1.9999999999999998e-26  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1039  sigma-54 dependent DNA-binding response regulator  40.67 
 
 
566 aa  117  9.999999999999999e-26  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2825  Fis family transcriptional regulator  36.84 
 
 
589 aa  96.7  3e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.208492  n/a   
 
 
-
 
NC_010814  Glov_2917  two component transcriptional regulator, LuxR family  35.14 
 
 
216 aa  93.6  2e-18  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0745  two component LuxR family transcriptional regulator  34.05 
 
 
212 aa  92.8  3e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3866  two component transcriptional regulator, LuxR family  29.61 
 
 
224 aa  91.3  1e-17  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1746  PAS modulated sigma54 specific transcriptional regulator, Fis family  34 
 
 
563 aa  90.1  3e-17  Geobacter lovleyi SZ  Bacteria  normal  0.156999  n/a   
 
 
-
 
NC_008751  Dvul_2226  sigma-54 dependent trancsriptional regulator  34.64 
 
 
569 aa  87.4  1e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  0.977744  normal 
 
 
-
 
NC_007517  Gmet_2158  two component LuxR family transcriptional regulator  29.87 
 
 
210 aa  87.4  2e-16  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0301144 
 
 
-
 
NC_011666  Msil_2682  two component transcriptional regulator, LuxR family  27.98 
 
 
222 aa  87.4  2e-16  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008340  Mlg_1621  two component LuxR family transcriptional regulator  31.19 
 
 
201 aa  87  2e-16  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2498  response regulator receiver modulated metal dependent phosphohydrolase  33.53 
 
 
367 aa  85.9  4e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.751736 
 
 
-
 
NC_013132  Cpin_6438  putative two component, sigma54 specific, transcriptional regulator, Fis family  34.35 
 
 
394 aa  85.1  8e-16  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00615091  normal  0.383003 
 
 
-
 
NC_008609  Ppro_1599  sigma-54 dependent trancsriptional regulator  36.05 
 
 
574 aa  84.3  0.000000000000001  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.0000201949  n/a   
 
 
-
 
NC_007404  Tbd_2237  two component LuxR family transcriptional regulator  29.65 
 
 
211 aa  84.7  0.000000000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  32.68 
 
 
266 aa  84.3  0.000000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_012853  Rleg_5743  two component transcriptional regulator, LuxR family  27.6 
 
 
212 aa  83.6  0.000000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1744  response regulator receiver protein  28.26 
 
 
213 aa  83.6  0.000000000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  0.933486  normal  0.721753 
 
 
-
 
NC_010571  Oter_1278  two component, sigma54 specific, Fis family transcriptional regulator  38.35 
 
 
452 aa  82.8  0.000000000000004  Opitutus terrae PB90-1  Bacteria  normal  0.902353  normal 
 
 
-
 
NC_007406  Nwi_1028  response regulator FixJ  29.55 
 
 
205 aa  82  0.000000000000006  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2788  response regulator FixJ  26.7 
 
 
205 aa  82  0.000000000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0210669  normal  0.0766422 
 
 
-
 
NC_011004  Rpal_2400  two component transcriptional regulator, LuxR family  25.79 
 
 
210 aa  81.6  0.000000000000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1500  Signal transduction histidine kinase (STHK) with CheB and CheR activity  30.18 
 
 
1483 aa  81.3  0.00000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0582  two component LuxR family transcriptional regulator  26.91 
 
 
206 aa  81.3  0.00000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.812865 
 
 
-
 
NC_008740  Maqu_2095  response regulator receiver protein  25.68 
 
 
216 aa  80.1  0.00000000000002  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1750  two component, sigma54 specific, transcriptional regulator, Fis family  32.35 
 
 
466 aa  80.5  0.00000000000002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1363  response regulator FixJ  29.55 
 
 
205 aa  80.9  0.00000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.433868  normal 
 
 
-
 
NC_008609  Ppro_1380  response regulator receiver modulated diguanylate cyclase  28.63 
 
 
454 aa  80.1  0.00000000000002  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00781234  n/a   
 
 
-
 
NC_002947  PP_3551  LuxR family DNA-binding response regulator  27.43 
 
 
210 aa  79.7  0.00000000000003  Pseudomonas putida KT2440  Bacteria  normal  0.178316  normal 
 
 
-
 
NC_009512  Pput_2223  response regulator receiver protein  27.43 
 
 
210 aa  79.7  0.00000000000003  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3108  LuxR response regulator receiver  25.91 
 
 
202 aa  79.7  0.00000000000004  Dechloromonas aromatica RCB  Bacteria  normal  0.786061  normal 
 
 
-
 
NC_007347  Reut_A1301  LuxR response regulator receiver  27.48 
 
 
210 aa  79.3  0.00000000000004  Ralstonia eutropha JMP134  Bacteria  normal  0.549132  n/a   
 
 
-
 
NC_010322  PputGB1_2371  two component LuxR family transcriptional regulator  29.2 
 
 
209 aa  79.3  0.00000000000004  Pseudomonas putida GB-1  Bacteria  normal  0.820742  normal 
 
 
-
 
NC_011769  DvMF_2149  two component, sigma54 specific, transcriptional regulator, Fis family  34.56 
 
 
477 aa  79  0.00000000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007964  Nham_0872  two component LuxR family transcriptional regulator  28.88 
 
 
210 aa  78.6  0.00000000000007  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  32.41 
 
 
264 aa  78.6  0.00000000000007  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_007925  RPC_4053  response regulator FixJ  27.27 
 
 
205 aa  78.6  0.00000000000008  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1833  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
460 aa  77.8  0.0000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.248577  n/a   
 
 
-
 
NC_004347  SO_3138  C4-dicarboxylate transport transcriptional regulatory protein  33.08 
 
 
459 aa  77.8  0.0000000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007484  Noc_1717  two component LuxR family transcriptional regulator  27.27 
 
 
205 aa  77.8  0.0000000000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0427  two component, sigma54 specific, Fis family transcriptional regulator  29.03 
 
 
458 aa  77.8  0.0000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1499  LuxR family two component transcriptional regulator  26.13 
 
 
209 aa  77.8  0.0000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2407  two component, sigma54 specific, Fis family transcriptional regulator  30.41 
 
 
461 aa  77.8  0.0000000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  32.82 
 
 
470 aa  77.4  0.0000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_011004  Rpal_1878  two component transcriptional regulator, LuxR family  26.13 
 
 
208 aa  77.4  0.0000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0017  two component, sigma54 specific, Fis family transcriptional regulator  34.85 
 
 
459 aa  77.4  0.0000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.120309  normal 
 
 
-
 
NC_007484  Noc_1701  two component LuxR family transcriptional regulator  27.15 
 
 
201 aa  77.4  0.0000000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0166117  n/a   
 
 
-
 
NC_010338  Caul_2344  two component LuxR family transcriptional regulator  28.44 
 
 
208 aa  77.4  0.0000000000002  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0298  signal transduction histidine kinase  30.74 
 
 
349 aa  77.4  0.0000000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.228007  hitchhiker  0.00285782 
 
 
-
 
NC_013173  Dbac_2828  response regulator receiver sensor signal transduction histidine kinase  28.14 
 
 
410 aa  77  0.0000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1906  response regulator FixJ  28.64 
 
 
205 aa  77  0.0000000000002  Nitrobacter hamburgensis X14  Bacteria  normal  0.700153  n/a   
 
 
-
 
NC_007973  Rmet_1194  two component LuxR family transcriptional regulator  26.58 
 
 
210 aa  77  0.0000000000002  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00813352  normal  0.892025 
 
 
-
 
NC_009720  Xaut_3389  response regulator receiver protein  27.88 
 
 
211 aa  76.3  0.0000000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2213  response regulator receiver protein  31.34 
 
 
461 aa  76.6  0.0000000000003  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3796  two component LuxR family transcriptional regulator  26.13 
 
 
209 aa  76.6  0.0000000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6109  two component LuxR family transcriptional regulator  28.18 
 
 
210 aa  76.6  0.0000000000003  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0504113 
 
 
-
 
NC_014230  CA2559_05930  DNA-binding response regulator, LuxR family protein  27.27 
 
 
207 aa  76.6  0.0000000000003  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  37.78 
 
 
461 aa  76.3  0.0000000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_011146  Gbem_3097  diguanylate cyclase  32.41 
 
 
458 aa  76.3  0.0000000000004  Geobacter bemidjiensis Bem  Bacteria  normal  0.948135  n/a   
 
 
-
 
NC_007778  RPB_3850  two component LuxR family transcriptional regulator  26.58 
 
 
209 aa  75.9  0.0000000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3082  two component LuxR family transcriptional regulator  29.55 
 
 
201 aa  76.3  0.0000000000004  Rhodoferax ferrireducens T118  Bacteria  normal  0.0470395  n/a   
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  32.47 
 
 
508 aa  76.3  0.0000000000004  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0645  two component LuxR family transcriptional regulator  25.33 
 
 
240 aa  75.9  0.0000000000005  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3041  two component LuxR family transcriptional regulator  26.7 
 
 
203 aa  75.9  0.0000000000005  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6678  two component transcriptional regulator, LuxR family  29.6 
 
 
207 aa  75.9  0.0000000000005  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_4405  two component, sigma54 specific, Fis family transcriptional regulator  34.81 
 
 
448 aa  75.9  0.0000000000005  Paracoccus denitrificans PD1222  Bacteria  normal  0.851623  normal  0.211367 
 
 
-
 
NC_009092  Shew_3240  two component LuxR family transcriptional regulator  27.81 
 
 
207 aa  75.5  0.0000000000006  Shewanella loihica PV-4  Bacteria  normal  normal  0.989265 
 
 
-
 
NC_011662  Tmz1t_3192  two component transcriptional regulator, LuxR family  25.7 
 
 
212 aa  75.5  0.0000000000006  Thauera sp. MZ1T  Bacteria  normal  0.513085  n/a   
 
 
-
 
NC_008609  Ppro_3079  two component, sigma54 specific, Fis family transcriptional regulator  37.14 
 
 
480 aa  75.5  0.0000000000006  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00177638  n/a   
 
 
-
 
NC_004116  SAG1792  DNA-binding response regulator  36.7 
 
 
224 aa  75.5  0.0000000000007  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0238902  n/a   
 
 
-
 
NC_010814  Glov_0143  two component, sigma54 specific, transcriptional regulator, Fis family  31.65 
 
 
449 aa  75.5  0.0000000000007  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1165  diguanylate cyclase  31.72 
 
 
459 aa  75.5  0.0000000000007  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000192138 
 
 
-
 
NC_008321  Shewmr4_1359  two component, sigma54 specific, Fis family transcriptional regulator  31.58 
 
 
459 aa  75.1  0.0000000000008  Shewanella sp. MR-4  Bacteria  normal  normal  0.0913399 
 
 
-
 
NC_008322  Shewmr7_1424  two component, sigma54 specific, Fis family transcriptional regulator  31.58 
 
 
459 aa  75.1  0.0000000000008  Shewanella sp. MR-7  Bacteria  normal  normal  0.545985 
 
 
-
 
NC_008577  Shewana3_1412  two component, sigma54 specific, Fis family transcriptional regulator  31.58 
 
 
459 aa  75.1  0.0000000000009  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0209  two component LuxR family transcriptional regulator  31.4 
 
 
225 aa  75.1  0.0000000000009  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.641351 
 
 
-
 
NC_009441  Fjoh_5047  two component, sigma54 specific, Fis family transcriptional regulator  32.59 
 
 
387 aa  74.7  0.000000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0897789  n/a   
 
 
-
 
NC_002977  MCA2774  LuxR family DNA-binding response regulator  28.12 
 
 
216 aa  74.7  0.000000000001  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2217  two component transcriptional regulator, winged helix family  28.57 
 
 
276 aa  74.3  0.000000000001  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00294817  normal 
 
 
-
 
NC_007298  Daro_0477  two component, sigma54 specific, Fis family transcriptional regulator  36.09 
 
 
443 aa  74.7  0.000000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2491  LuxR response regulator receiver  28.63 
 
 
211 aa  74.7  0.000000000001  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000456787  normal 
 
 
-
 
NC_007958  RPD_1342  response regulator FixJ  27.73 
 
 
205 aa  74.3  0.000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.400465  normal 
 
 
-
 
NC_012918  GM21_0684  two component, sigma54 specific, transcriptional regulator, Fis family  30.83 
 
 
469 aa  74.7  0.000000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000150794 
 
 
-
 
NC_008321  Shewmr4_2685  two component, sigma54 specific, Fis family transcriptional regulator  33.03 
 
 
425 aa  74.7  0.000000000001  Shewanella sp. MR-4  Bacteria  normal  0.501083  normal  0.0990314 
 
 
-
 
NC_013173  Dbac_2713  two component, sigma54 specific, transcriptional regulator, Fis family  32.82 
 
 
454 aa  74.3  0.000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1260  two component, sigma54 specific, transcriptional regulator, Fis family  37.96 
 
 
452 aa  73.6  0.000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.0000000000141339 
 
 
-
 
NC_008751  Dvul_2845  two component, sigma54 specific, Fis family transcriptional regulator  39.81 
 
 
454 aa  73.9  0.000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2779  PAS modulated sigma54 specific transcriptional regulator, Fis family  43.81 
 
 
737 aa  73.9  0.000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007348  Reut_B3602  LuxR response regulator receiver  25.11 
 
 
206 aa  74.3  0.000000000002  Ralstonia eutropha JMP134  Bacteria  normal  0.66617  n/a   
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  31.82 
 
 
448 aa  73.9  0.000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  33.33 
 
 
1139 aa  73.6  0.000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.187038 
 
 
-
 
NC_007517  Gmet_2563  two component, sigma54 specific, Fis family transcriptional regulator  36.54 
 
 
480 aa  73.9  0.000000000002  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00247378 
 
 
-
 
NC_007519  Dde_0109  two component Fis family transcriptional regulator  32.33 
 
 
466 aa  73.9  0.000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1135  two component LuxR family transcriptional regulator  29.09 
 
 
201 aa  73.9  0.000000000002  Rhodoferax ferrireducens T118  Bacteria  normal  0.564331  n/a   
 
 
-
 
NC_010505  Mrad2831_2784  signal transduction histidine kinase  36.3 
 
 
354 aa  73.9  0.000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0548  two component, sigma54 specific, transcriptional regulator, Fis family  31.33 
 
 
452 aa  73.9  0.000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.902927  normal 
 
 
-
 
NC_009654  Mmwyl1_0915  two component, sigma54 specific, Fis family transcriptional regulator  29.56 
 
 
452 aa  73.6  0.000000000002  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_0819  LuxR family two component transcriptional regulator  26.09 
 
 
227 aa  73.6  0.000000000002  'Nostoc azollae' 0708  Bacteria  normal  0.633548  n/a   
 
 
-
 
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