Gene Noc_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1701 
Symbol 
ID3705614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1904490 
End bp1905095 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content43% 
IMG OID637738182 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_343703 
Protein GI77165178 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0166117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCTA AAAATACGAT ATATATCGTG GATGATGATG GAGCAATGCG TAAATCACTT 
GCCTTGCTTT TGCAAGGGGA AGGTTTTGAT GTAAAAACTT ACTCTTCCGC GCAAACATTT 
ATTGAAAGGG AGAGCCCCCC CTTAACGGGA TGTCTCTTGC TAGATGTACG AATGCCTGGC 
ATAGATGGGT TTGAATTACA AAACATATTA CAATTACGGG GAATTCACCT CTCCATTATC 
ATGATTACCG GACATGCCGA TGTACCCATG GCGGTTCGGG CAATGAAACT AGGAGCCAAG 
GATTTTATTG AAAAACCCTT CCGTGCTCAA ACCCTATTGG ATCGTCTCCA TAAAATATTA 
TCCGAAGAAA CTCCTAAGAA GCAATTCCAC TCGCAGCCAG AAAAATTAGC CCAGCTAGAG 
TCCCTAACCC GGCGAGAACG TCAAGTATTT AAACTGCTCG CACAAGGCAA AATGAACAAA 
CACATCGCCG CCGAGCTATG CATTAGTATT CGAACCGTTG AAACTCATCG GGCTAATATT 
ATGGAGAAAT TAAAAGTTAG ATCCCTTGCC GATATTGTCC GATTGGCTAT TTTGGAAACG 
CTTTAA
 
Protein sequence
MAAKNTIYIV DDDGAMRKSL ALLLQGEGFD VKTYSSAQTF IERESPPLTG CLLLDVRMPG 
IDGFELQNIL QLRGIHLSII MITGHADVPM AVRAMKLGAK DFIEKPFRAQ TLLDRLHKIL 
SEETPKKQFH SQPEKLAQLE SLTRRERQVF KLLAQGKMNK HIAAELCISI RTVETHRANI 
MEKLKVRSLA DIVRLAILET L