Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0684 |
Symbol | |
ID | 8135999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 817649 |
End bp | 819058 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644868301 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_003020516 |
Protein GI | 253699327 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0000000000150794 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATATTC TCGTGGTTGA CGATGAGTCT GTGATCAGAG ATGGCCTTGC CAGAATACTG GAGGGAGACT CCTTCACGGT GGACACGGCA AAGAGCGGCC ATGTCGCCAT TGAGCATCTC CAGCAAAAAG AGTTCGACCT GATAATAACC GACCTGAAGA TGCCGGGGAT GAGCGGGTTC GAGGTCCTTG CCGCGGTGAA GACGCTGCAG CCGGAAACCC CGGTCATCAT GATCACCGGC TTCGCCACGG TGGAAACCGC GGTCGAGGCG ATGAAAAACG GCACGGTCGA CTACATCGTG AAGCCCTTCA CCCCGGAGCA GATACTGGAA AAGGTGCACC TGGCGCTGGA GCAGAAAAAG AGCACGGTGG AAGATCTCTA CGTGAAGAAG GAGATCGACT GCCATCACGG CTTCGACCAG TTCATCGGCG ACAGCCGGGA GATGCAGAAG GTCTACCGCC GGATCATGCA GGTTGCCGCC ACCGACAGCA CCGTCCTCAT CACCGGGGAG AGCGGCACCG GAAAGGAGTT GGCGGCGCGG GCGATCCACA AGAACAGCCC CAGGAGGGAC CTTCCCTTCG TCGCCGTCGA TTGCACGGCG CTTGCCGAAA ACCTCCTGGA GAGCGAGCTG TTCGGACACG TGAAGGGTTC CTTCACCGGC GCGATGCAGA CCAAGATGGG GCTCTTCATG GTCGCCGACG GCGGCACGCT TTTCCTGGAT GAGGTCTCCA ACATAAGCCT CGGCACGCAG GCGAAGCTCT TGCGGGCCCT GCAGGAGAGG CAGGTGACCC CCATCGGGGG GACGCAGCCG GTCTCCTTCA ACATACACCT CGTAGCCGCC ACCAACCGCA ACCTGAAGAC CATGGTGTCG GAGGGGACCT TCCGCGAAGA CCTTTATTTC CGGCTCAACA TCATCCCCCT GGACCTCCCC CCGCTTAGGG AGCGCAAGGG GGACATACCG CTTTTGGTCC GCCACTTCAT GAACAAGTTC ATGGAGGAGG TAGGCAAGGA CCTGCGCGGC ATCTCGCCCG AAGCGATGCA GTTCCTGGAA AACTACTCCT ATCCCGGCAA CGTCAGGGAA CTGGTGAACA CCCTGGAGCG CGGCGTGGTG CTGGCCGAGG GTGACGTGAT CCAGAAGGAG AACCTGGAAC TGGGCGATTC CGCCGAGTCC GAGCTTTGCA CCGGGTTCGA CGGCTTCGTA CCGACCAGCG CCGAGGCTTT AAAGGAGATG AAACGCCACA TACGCGACCG CTCGGTGGAG AACGTCGAGA AGGCCTTCGT CATCAGCGCG CTCAAGCGGA GCAACTGGAA CATCTCCCGC GCCGCCGAGG AGACCGGGAT GCTGCGCCCC AACTTCCAGA CCATGCTGAA GCGGCTGGGG ATCTCGGTGA AGGACTACTT CGGCAAGTAG
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Protein sequence | MNILVVDDES VIRDGLARIL EGDSFTVDTA KSGHVAIEHL QQKEFDLIIT DLKMPGMSGF EVLAAVKTLQ PETPVIMITG FATVETAVEA MKNGTVDYIV KPFTPEQILE KVHLALEQKK STVEDLYVKK EIDCHHGFDQ FIGDSREMQK VYRRIMQVAA TDSTVLITGE SGTGKELAAR AIHKNSPRRD LPFVAVDCTA LAENLLESEL FGHVKGSFTG AMQTKMGLFM VADGGTLFLD EVSNISLGTQ AKLLRALQER QVTPIGGTQP VSFNIHLVAA TNRNLKTMVS EGTFREDLYF RLNIIPLDLP PLRERKGDIP LLVRHFMNKF MEEVGKDLRG ISPEAMQFLE NYSYPGNVRE LVNTLERGVV LAEGDVIQKE NLELGDSAES ELCTGFDGFV PTSAEALKEM KRHIRDRSVE NVEKAFVISA LKRSNWNISR AAEETGMLRP NFQTMLKRLG ISVKDYFGK
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