Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0548 |
Symbol | |
ID | 8418358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 659170 |
End bp | 660528 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645037114 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_003197423 |
Protein GI | 258404681 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.902927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCAC GTATCCTGGT CGTTGATGAC GAACTCGATA TCCGCGTCTC TTTGTCCGGA ATTCTTGAAG ATGAAGGGCA CACCGTCATG GAGGCCGACA GCGGCGAAGC CGGGCTGACA GCGATGGCCG GGAAGGAAAT CGATCTTGTT TTTTTGGATA TCTGGCTGCC GGGCATGGAT GGGTTGGCTG TACTGGAACG TTTGCGCCAG GAGTGGCCAG ATATTCCCGT GATCATGATT TCCGGGCACG GCACGATTGA GACTGCGGTC AGCGCGATCA AAAACGGGGC CCACGACTTC ATCGAAAAAC CGCTTTCTTT GGAAAAAGTG GTCATCACAG CCAACAAGGC CCTGGAATTC AGCAAACTCA AACGGGAAAA TCGGGATCTG CGTTCACGGG TAAAAACCGA TGTCGTCCAA GAGATCAGCG GTAGCAGTGG GGCCATCGCC TCCTTGCGCG CCCAGATCGA TCGGGTGGCG CCCACCGATG CCTGGGTGCT CATCAGCGGC GAGAACGGAA CCGGCAAAGA AATCGTGGCC CGCTCGCTGC ATGTTAAAAG CCGGCGGGCC AAGCGCCCGA TGATCGCCGT GAACTGTGCG GCCATCCCCG AAGAACTCAT AGAAAGCGAA CTCTTTGGAC ATGAAAAAGG GGCGTTCACG GGCGCGGAAC AGGCTCAGCG GGGCAAGTTT GAGTTGGCCC ACAAGGGAAC GCTGTTCCTG GACGAGATAG GCGACATGAG CCTGAAGACC CAGGCCAAAG TCCTCAGAAT CCTCCAAGAG CAATCCTTTG AACGGGTCGG AGGGCGAAAG ACCCTCAATG TCGATGTCCG GGTCATTGCC GCGACAAACA AGGATTTGCC TCAGGAGATC CAGGCTGGCC GGTTCCGCGA GGATCTGTAC TACCGGCTCA AAGTTTTTCC CCTGGAAGTT CCGCCTTTGC GACTGCGTAT GCAGGATGTC CCGGATCTGT TGCAGGAGTT TGTAGCGCTT TTGAGCCGGG AGCACGGCTT CAAACCGCTC TCGTTCACCC CGGAGGCCCT GCGACGGTTA CAGTCCTATA GCTGGCCGGG CAATGTCCGG GAACTCAAGA ATTTTGTGGA ACGCATGCTG ATTATGTACG CCGGAGACGA GGTTGGTCCG GAGCACCTTC CCGGCGATGT GGAAGCGCCA ATGGCCGGTG GACATGAACG AGGTGTCGGC TGGGACGATG ATTTCAAGAA TGCCCGGGCC CGTTTTGAAA AGGATTTTTT GACCCAGAAG CTCGAACAAT GCGGGGGCAA CGTGGCCCAG ACCGCCGAGC AGGTCGGCCT GGAGCGGAGC TATTTGTATC GCAAACTCAA AGGCTACGGG CTGATCTGA
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Protein sequence | MQARILVVDD ELDIRVSLSG ILEDEGHTVM EADSGEAGLT AMAGKEIDLV FLDIWLPGMD GLAVLERLRQ EWPDIPVIMI SGHGTIETAV SAIKNGAHDF IEKPLSLEKV VITANKALEF SKLKRENRDL RSRVKTDVVQ EISGSSGAIA SLRAQIDRVA PTDAWVLISG ENGTGKEIVA RSLHVKSRRA KRPMIAVNCA AIPEELIESE LFGHEKGAFT GAEQAQRGKF ELAHKGTLFL DEIGDMSLKT QAKVLRILQE QSFERVGGRK TLNVDVRVIA ATNKDLPQEI QAGRFREDLY YRLKVFPLEV PPLRLRMQDV PDLLQEFVAL LSREHGFKPL SFTPEALRRL QSYSWPGNVR ELKNFVERML IMYAGDEVGP EHLPGDVEAP MAGGHERGVG WDDDFKNARA RFEKDFLTQK LEQCGGNVAQ TAEQVGLERS YLYRKLKGYG LI
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