Gene Pcar_2365 details

Gene Information

• Locus tag: Pcar_2365
• ID: 3725067
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 2781636
• End bp: 2783363
• Gene Length: 1728 bp
• Protein Length: 575 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637751976
• Product: two component signal transduction response regulator
• Protein accession: YP_357774
• Protein GI: 77919959
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 56
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCGTA ATGCCGACAG CCCTGCCAGA ATTCTGGTTA TCGACGATGA AAAGTGCCTG 
CGCTTCAGCT TCGAGCGTTT TCTGGCCGCG GAAGGTTATG ATGTTTCAAC CGCAGCAGAA 
TTCGACGAGG CCGTGAGCTT GTTGCGACAA GGTGAATATG ATCTGGTGTT TTCGGATATC 
GTGCTTGGCG GTCGCACCGG GCTGGAGGTG CTTCGATCTT TACGGGAATA CGATCAGAGC 
ACCCCGGTGG TTATGATCAC CGGCTTTCCC AATGTCGATA CCGCCGCTGA GGCTGTGCGT 
CTGGGAGCCT ACGATTATAT TTCCAAACCG GTGGTTAAAA AAGATCTGTT GCAGGTGGCC 
CGTTCCGCGC TCAAGTACAA GCAGGCCATC GATCGAGAGG CGAATACCCG AACCAATCTT 
GCCGCCATTT TCGAAAGTGT GAAAGACGGT TTGCTGTCCG TGGATGCATC GGGCTGCGTT 
ACGGATTTTA ACCAGGCGGC CAGCCGCCTG TGCGGCTGGA GCAAGGATGA TCGCGGCGAA 
AAGATCGACG CATTGTCCAT GCCTTGCGCC GGAACGTGCC GCGACCTTTT GACGCGCACC 
CTCGAGGAAG GCAAATCCAT GGAACTTAAG CGCATGGAGT GCGAACATCT CGAGCGGGCC 
GGGCAGGTGG TTTCCTTGTC GACCTCGCCG CTGCAAAACA AGGAGGGCGA TGTTTTTGGC 
GCCGTGATGG TGGTGCGTGA TGAAACCCGT CTCGACGATT TGGAGCGCAG CCTTAACAAG 
CGCCAGTCTT TTCATCGCAT GATAGCTACC AGTTCCAAAA TGCAGCAGGT ATTCGGTCTG 
ATCGAAACGC TGGCGCAGGT TCCCTCGACG GTGCTGATTC TCGGCGAGAG TGGCACCGGG 
AAAGAACTGG TGGCCGAAGC TCTGCATCTT TCCGGACCTC GCAAAAACCG GCCTCTGGTC 
AAGGTGAACT GCGCCGCTCT GTCCGATACG CTGTTGGAAA GCGAACTCTT CGGGCATGTC 
AAAGGATCCT TCACCGGAGC GGTTAAGGAT CATGTCGGCC GTTTTCAAAA AGCCGATGGG 
GGGACGATCT TTCTCGATGA GATCGGTGAT ATCTCTCCGC GCATGCAGCT GCGGTTGTTG 
AGAGTGCTGC AGGAAAAAGA GGTCGAACGC ATCGGCGATT CGACGCCGGT CAAGGTCGAT 
GTGCGCATTG TTGCCGCCAC CAATCAGGAC CTTGAAGAAA AAGTCCGCTC CGGCGAGTTC 
CGCCAGGACC TCTATTATCG CCTCAAGGTT ATCACTTTGG CTTTACCCCC ACTTCGGGAG 
CGCAAGGAAG ATATCCCCCC GATGGTGGAT CATTTCATTC AACGATACAA CGAGGTGCTC 
GGCCGCAATC TTCAAGGTGT CGACCAGGAG GTTATGCGGG CGATGCAGGC GTATGACTGG 
CCTGGCAATG TGCGCCAGTT GGAGCATGCC ATCGAACACA TCCTGATTCA CTGTACCGAG 
CCTCTGGCGT CTCTGGCCCA TGTTCCGGAA GAAATTCTTC AGGGCGAGCA GGCTGTCGGT 
AAATACTGTG CTGACTCGGA GGAGCAGGAA CAGCAGCAGA TCCTGGCCGC TTTGGACAAA 
ACCGATTGGA ATAAGGCCAA GGCCGCTCGT CTTTTGGGCA TTGATCGCAA GACCTTGTAC 
CGTAAGATCG AGAAGTTCGG GCTGGTCGAG CCTTTCGCAC AAGTCTGA 

 

Protein sequence

MTRNADSPAR ILVIDDEKCL RFSFERFLAA EGYDVSTAAE FDEAVSLLRQ GEYDLVFSDI 
VLGGRTGLEV LRSLREYDQS TPVVMITGFP NVDTAAEAVR LGAYDYISKP VVKKDLLQVA 
RSALKYKQAI DREANTRTNL AAIFESVKDG LLSVDASGCV TDFNQAASRL CGWSKDDRGE 
KIDALSMPCA GTCRDLLTRT LEEGKSMELK RMECEHLERA GQVVSLSTSP LQNKEGDVFG 
AVMVVRDETR LDDLERSLNK RQSFHRMIAT SSKMQQVFGL IETLAQVPST VLILGESGTG 
KELVAEALHL SGPRKNRPLV KVNCAALSDT LLESELFGHV KGSFTGAVKD HVGRFQKADG 
GTIFLDEIGD ISPRMQLRLL RVLQEKEVER IGDSTPVKVD VRIVAATNQD LEEKVRSGEF 
RQDLYYRLKV ITLALPPLRE RKEDIPPMVD HFIQRYNEVL GRNLQGVDQE VMRAMQAYDW 
PGNVRQLEHA IEHILIHCTE PLASLAHVPE EILQGEQAVG KYCADSEEQE QQQILAALDK 
TDWNKAKAAR LLGIDRKTLY RKIEKFGLVE PFAQV