Gene Rfer_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3082 
Symbol 
ID3963278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp3416055 
End bp3416660 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content53% 
IMG OID637917902 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_524323 
Protein GI89901852 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0470395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAGG AAACTGTGTT CATAGTCGAT GATGATGCAT CGATTCGAGA TTCGTTGTCA 
CTCTTATTGA GTCTGCGGGG ATATGCAACT GCGCTGTTTG CCAATGCCGA GGATTTTTTG 
GCGGCGCTTC AGCCCGATTG GCGAGGCTGT GTGGTGGTTG ACATCCGAAT GCCCGGCATG 
TCGGGGTTAG AGCTTCAAAG GTGTCTGCGA GAGCGCGGTC CGAGTTTGCC AGTCATTGTC 
ATAACAGCGC ACGGAGACGT CGCAGCGGCC CGACAGGCGT TTCTGGCAGA TGCCGTGGAC 
TTTATTGAGA AACCTTTTGA CGGCAAGCAA CTTCTGGGTG CGATCGAGAA CGCCCTGTCT 
GGCTTTCGCG CCCTTGACAT TGCACAGGCT AGAGCTGCTT TCACCAAACC AACGCTTGGG 
CAACTCTCGA TACGAGAGCG TGAAGTAATG ACATTGATGG TTAAGGGTCT TCACAACCGT 
CGAATTGCTG AGACGCTTGG TATCAGTCCC AGAACCGTTG AGGTCCACAA GGCACGGGTG 
ATGGAAAAAC TCGGCGCACA AAACATTGTC GATCTGGTGC GATTGGTTGA TAAGGGCTTG 
ACCTGA
 
Protein sequence
MHKETVFIVD DDASIRDSLS LLLSLRGYAT ALFANAEDFL AALQPDWRGC VVVDIRMPGM 
SGLELQRCLR ERGPSLPVIV ITAHGDVAAA RQAFLADAVD FIEKPFDGKQ LLGAIENALS 
GFRALDIAQA RAAFTKPTLG QLSIREREVM TLMVKGLHNR RIAETLGISP RTVEVHKARV 
MEKLGAQNIV DLVRLVDKGL T