| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2685 |
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| Symbol | |
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| ID | 4253256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3204791 |
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| End bp | 3206068 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638119320 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_734813 |
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| Protein GI | 113971020 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.501083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0990314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATTG AAAATTCGAC GCCCTTTACC GTGCTACTCG TCGATGATGA TGAAGATGTA
CTCACTGCAT ACCGCCATTT ATTACAGTTA TCGGGCTACA GCGCTAAGGG CACCCACTCG
CCGAGTAAGG CCCTTGCCCT GCTCAATGAA AATTGGAACG GAGTTGTCGT CTCAGATATT
TATATGCCGG CGATGAATGG CATGGATTTG CTCAATGAAG TGAAAAAAAT CGATCCCGAA
ATCCCAGTCA TCATGATCAC TGGTCATGGT GATATTCCTC TGGCCGTCGA GGCGGTTAAA
CGGGGGGCAT TCGATTTTCT CGAAAAACCC CTCGACTCGG CACAATTTTT ACAGCTGCTC
AAGCGCGCAC AACAGATCCG CCAAGGGATC ATTGAACAAC GGGAAGCGAT TTCGAGCACC
TTTAAGGAGC ACCTCTTTGG CACCAGCGAG CAAATCAACC AGATCCGCCA GCAACTGAGT
CAAATTGCCA GAATCGATAA AGATGTGATG ATTGAGGGGC AAATCGGCAC GGGCCGACAC
TTAGTCGCCT CAGTACTTCA TAGCTTAAGT CAGCATAAAA ACAACAGCTT AATCATCCAT
GATTGCAAAG AGTACCCCAG CTTAACCGAG TTAGAGGCCA GCATTGCTAA AGTCCAAAAT
GGCACCTTAG TGCTGCGTTC ATTAACTCAA CTGAGCCATG AGCATCAACG CTGGCTATGC
ACTCGTTTGC TGGATCAAGA AAGACTCAAC ACCAAAAGCC ATAGAACCAT TTGTATCTTC
GATACTAATC CCGACGATGA AGTCAAAAGT GGTGCCCTGT TGCCCGAACT CTATTACTAC
TTCTCACAGG CTCGGATCCA ATTGCCCACT TTGGCCGAAC GTAAGAGCGA TATTATTCCC
CTGTTCCGCA ACTTCCTGAG CCAAAGCTGT AAGCGCTTTG ACATCCCTAT CCCTAAAATT
GACTTAAATT ACATAGAGAT CCTCAAGCGC CACCATTGGC CTGGTAACAT TCGCGAGCTG
CGAAACCTTG CCGAACTCTA TGCGGTTGGC ATTATCAAAC TCCCCGGCGA AGAAACCCTT
AAATTAGTGC AAGCCCCCGA GGCGCCGCTC GATGAACTCG TCGACGCCTA TGAGAAGCAA
GTGATTGAGA ACATTCTGTA TTTGTGTTCA GGCAGGGTAA CAGATGCCGC TAATTACTTA
GGGATCCCAC GTAAGAAGCT GTACCTAAGA ATGAAAAAAC TGAACTTGGA GAAAGATAAG
TTTAAGCCTA AGTCATAA
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| Protein sequence | MPIENSTPFT VLLVDDDEDV LTAYRHLLQL SGYSAKGTHS PSKALALLNE NWNGVVVSDI
YMPAMNGMDL LNEVKKIDPE IPVIMITGHG DIPLAVEAVK RGAFDFLEKP LDSAQFLQLL
KRAQQIRQGI IEQREAISST FKEHLFGTSE QINQIRQQLS QIARIDKDVM IEGQIGTGRH
LVASVLHSLS QHKNNSLIIH DCKEYPSLTE LEASIAKVQN GTLVLRSLTQ LSHEHQRWLC
TRLLDQERLN TKSHRTICIF DTNPDDEVKS GALLPELYYY FSQARIQLPT LAERKSDIIP
LFRNFLSQSC KRFDIPIPKI DLNYIEILKR HHWPGNIREL RNLAELYAVG IIKLPGEETL
KLVQAPEAPL DELVDAYEKQ VIENILYLCS GRVTDAANYL GIPRKKLYLR MKKLNLEKDK
FKPKS
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