| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1165 |
|---|
| Symbol | |
|---|
| ID | 8136487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1354537 |
|---|
| End bp | 1355916 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644868776 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_003020984 |
|---|
| Protein GI | 253699795 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.000192138 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGGA TTCTTTTAGT CGAAGACGAC AGCTTCTTCA GAGAGATCTT CACAGACCTT
CTCAAGGAAG ATGGCTATAG CGTCGAGGTG GCCGTCTCCG GTGAAGAGGC GCTGGAGATG
ATCGGAAAGG GCGGGTATCA CCTGGTTGTC ACCGACCTGG TGATGCGCGA CGTGAGCGGA
CTGGACATCC TGTCGACGGT AAAGAGGCTG GACCCTGCCA CGGCGGTCAT CATGGTCACC
GGGCACGCCA ATGTGGAAAC CGCCATCTAC GCGCTGAAAA ACGGGGCAAC CGATTACCTC
ATCAAACCCA TCAACCACGA CGAATTCCGG CACATCGTCG CGCACTGCAT GGAGCAGCGC
AGGCTTCTGG ACGAGAACCT TGAGCTGAAG GGGCTGGTCA ACCTGTTCCA GGTGAGCCAG
AACATAGCCA ACTGCCTGGA ACTGGAGCGG ATCTATCCTC TTTTGATGGA GGCGCTGTCC
AAGGAGATCG GCGCCAACCG GGGGCTTGGG TACTTCAGCG AGGGGGGGCA GCTGGTACTG
CACGAGCTGA AGGGGATCGA CGAGCAGAGC GCTCCCCTGC TCGGGCAGGC GGTGATAGCC
GAGTGCGACC TGCATGACGA CGGCGTCAGC AACCTCATCA TGCTCAGGGA TTTTCTCCCG
GAAGGGGCGG GGTTCGGCGA GATCAGGGAC GCGATCTGCC TCTACATCCG CCAGAAAAGC
ACGCTGGAAG GGGTCATCAT CCTGTTCAAC GACCCTGACT CCACGCTCCC CATGGAGGTG
AACCGCAAGC ACGTCACCTT CCTCCTCGAT CAAGCCTCGC TGGCTCTCGA CAACGCCGCA
CGTTACAACT TCGCCAAGGA CCTGCTCTAT ATCGACGAGT TGACCGGTCT TTACAATTAC
CGCTACCTCG ACGTGGTGCT GGAGCGGGAG CTGAAACGCT CGGAGCGCTA CGGTTCCAAC
CTCTCCGTGC TCTTTCTGGA CATCGACCTC TTCAAGTCGG TGAACGACAC CTTCGGCCAC
CTGATCGGCA GCCGTGTGCT GCGGGAGATC GGGAGCCTGC TCAGAAAGAG CGTCCGCGAC
GTGGATGCCG TGATCCGCTA CGGCGGCGAC GAGTACACCA TCGTGCTGGT CGAGACCGGC
CTTGACGGCG CGGCGATAGT CGCCGAGCGT ATCAGGAAGA TGGTTGAGGC ACACACCTTC
TCCAAGGCCG ACGGGCTCGC CATCAAGCTC ACCGTCAGCC TAGGCTACGC CTGCTCCCCG
GACGACGCCT CCACGAAGAC GGAGCTCCTC GAGATGGCGG ATCAGGCGAT GTACCGCGGC
AAGGCCGCCG GCAAGAACAA GGCCTTCCAT GCCCAGCGGT TGCCCAATCC CGCCCCATAA
|
|---|
| Protein sequence | MERILLVEDD SFFREIFTDL LKEDGYSVEV AVSGEEALEM IGKGGYHLVV TDLVMRDVSG
LDILSTVKRL DPATAVIMVT GHANVETAIY ALKNGATDYL IKPINHDEFR HIVAHCMEQR
RLLDENLELK GLVNLFQVSQ NIANCLELER IYPLLMEALS KEIGANRGLG YFSEGGQLVL
HELKGIDEQS APLLGQAVIA ECDLHDDGVS NLIMLRDFLP EGAGFGEIRD AICLYIRQKS
TLEGVIILFN DPDSTLPMEV NRKHVTFLLD QASLALDNAA RYNFAKDLLY IDELTGLYNY
RYLDVVLERE LKRSERYGSN LSVLFLDIDL FKSVNDTFGH LIGSRVLREI GSLLRKSVRD
VDAVIRYGGD EYTIVLVETG LDGAAIVAER IRKMVEAHTF SKADGLAIKL TVSLGYACSP
DDASTKTELL EMADQAMYRG KAAGKNKAFH AQRLPNPAP
|
|---|
| |