Gene GM21_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1165 
Symbol 
ID8136487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1354537 
End bp1355916 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content61% 
IMG OID644868776 
Productdiguanylate cyclase 
Protein accessionYP_003020984 
Protein GI253699795 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.000192138 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAGGA TTCTTTTAGT CGAAGACGAC AGCTTCTTCA GAGAGATCTT CACAGACCTT 
CTCAAGGAAG ATGGCTATAG CGTCGAGGTG GCCGTCTCCG GTGAAGAGGC GCTGGAGATG
ATCGGAAAGG GCGGGTATCA CCTGGTTGTC ACCGACCTGG TGATGCGCGA CGTGAGCGGA
CTGGACATCC TGTCGACGGT AAAGAGGCTG GACCCTGCCA CGGCGGTCAT CATGGTCACC
GGGCACGCCA ATGTGGAAAC CGCCATCTAC GCGCTGAAAA ACGGGGCAAC CGATTACCTC
ATCAAACCCA TCAACCACGA CGAATTCCGG CACATCGTCG CGCACTGCAT GGAGCAGCGC
AGGCTTCTGG ACGAGAACCT TGAGCTGAAG GGGCTGGTCA ACCTGTTCCA GGTGAGCCAG
AACATAGCCA ACTGCCTGGA ACTGGAGCGG ATCTATCCTC TTTTGATGGA GGCGCTGTCC
AAGGAGATCG GCGCCAACCG GGGGCTTGGG TACTTCAGCG AGGGGGGGCA GCTGGTACTG
CACGAGCTGA AGGGGATCGA CGAGCAGAGC GCTCCCCTGC TCGGGCAGGC GGTGATAGCC
GAGTGCGACC TGCATGACGA CGGCGTCAGC AACCTCATCA TGCTCAGGGA TTTTCTCCCG
GAAGGGGCGG GGTTCGGCGA GATCAGGGAC GCGATCTGCC TCTACATCCG CCAGAAAAGC
ACGCTGGAAG GGGTCATCAT CCTGTTCAAC GACCCTGACT CCACGCTCCC CATGGAGGTG
AACCGCAAGC ACGTCACCTT CCTCCTCGAT CAAGCCTCGC TGGCTCTCGA CAACGCCGCA
CGTTACAACT TCGCCAAGGA CCTGCTCTAT ATCGACGAGT TGACCGGTCT TTACAATTAC
CGCTACCTCG ACGTGGTGCT GGAGCGGGAG CTGAAACGCT CGGAGCGCTA CGGTTCCAAC
CTCTCCGTGC TCTTTCTGGA CATCGACCTC TTCAAGTCGG TGAACGACAC CTTCGGCCAC
CTGATCGGCA GCCGTGTGCT GCGGGAGATC GGGAGCCTGC TCAGAAAGAG CGTCCGCGAC
GTGGATGCCG TGATCCGCTA CGGCGGCGAC GAGTACACCA TCGTGCTGGT CGAGACCGGC
CTTGACGGCG CGGCGATAGT CGCCGAGCGT ATCAGGAAGA TGGTTGAGGC ACACACCTTC
TCCAAGGCCG ACGGGCTCGC CATCAAGCTC ACCGTCAGCC TAGGCTACGC CTGCTCCCCG
GACGACGCCT CCACGAAGAC GGAGCTCCTC GAGATGGCGG ATCAGGCGAT GTACCGCGGC
AAGGCCGCCG GCAAGAACAA GGCCTTCCAT GCCCAGCGGT TGCCCAATCC CGCCCCATAA
 
Protein sequence
MERILLVEDD SFFREIFTDL LKEDGYSVEV AVSGEEALEM IGKGGYHLVV TDLVMRDVSG 
LDILSTVKRL DPATAVIMVT GHANVETAIY ALKNGATDYL IKPINHDEFR HIVAHCMEQR
RLLDENLELK GLVNLFQVSQ NIANCLELER IYPLLMEALS KEIGANRGLG YFSEGGQLVL
HELKGIDEQS APLLGQAVIA ECDLHDDGVS NLIMLRDFLP EGAGFGEIRD AICLYIRQKS
TLEGVIILFN DPDSTLPMEV NRKHVTFLLD QASLALDNAA RYNFAKDLLY IDELTGLYNY
RYLDVVLERE LKRSERYGSN LSVLFLDIDL FKSVNDTFGH LIGSRVLREI GSLLRKSVRD
VDAVIRYGGD EYTIVLVETG LDGAAIVAER IRKMVEAHTF SKADGLAIKL TVSLGYACSP
DDASTKTELL EMADQAMYRG KAAGKNKAFH AQRLPNPAP