| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1746 |
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| Symbol | |
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| ID | 6369501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 1857930 |
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| End bp | 1859621 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642677151 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_001951982 |
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| Protein GI | 189424805 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.156999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGGCA GGATACTGAT TGTAGATGAT GAAATTCCGG TCACCCGCCT GATCAGCACG
GTTCTTGGCA ATGACGGACA TCAGACTGAT GTGGCCCACA GCTGTCATGA CGCGCTCACC
TTGATCGGGC AGTATCCCTA CGATGTCATT TTTATCGATA TCAAGCTGGA CAGGGACCAA
GGCGGACTGG CGCTGCTCAA GACAGCCACG GCGATCACCC CCACCAGCCG TGTGATCATG
ATGACCGGAT ACCCGGATGT TGCCACTGCA ACTGAAGCAG TCCGTTACGG CGCCTTTGAT
TATCTCTGTA AACCGTTTGA CAGCCTGCAG ATCAGCAGCA TCACCCGCCA TGCCATTGAA
AACCGGCGGC TGCAGCTTGA ACGGGAGCAG TTTCGCGCCA ACCTGGAAGC AATCAACCGC
AGCATCAGTG ATGCTATCAT CATGGTGGAT CAGCGCCTCC AGTTGCAGCA CCTTAACGAT
GCAGCCCTGC AATGCGGCTA CAATCCTGCT CAGCTGGGGC AACCGCTTGA TCAGCTAAGC
ACCGGCTGCC TCGGCAGTTG CCGCATGGCC CTGGCAGAGA CCGTCCGAAC TGGACAACGT
CACGAACTGA AACGGATTGA ATGCCGGGGT ACCGGCAACC GTACCAGGAT TGTCAGTGTC
ATCGCCACCC CGACCACCAG CGAGGACGGA GCCCGTACCG GAGCGGTAGC AGTCATACGT
GACGAAACCA GGCTGGACGA TCTGGAGCGA CAGCTGCAGC AACGCAGCCG CTTTCACACC
ATCATCGGCC ATGCACCGGT CATGCAGCAG CTCTACACCA GGATTGAGGC CCTGGCCGAT
GTCACCAGCA CAGTCCTGAT CTGCGGAGAA AGCGGCACCG GTAAAGAATT AGTGGCCCAG
GCACTCCATG AATGCGGTGC AAGAAAACAG AAGCCGTTTA TCAAACTCAA CTGTTCGGCA
CTACCGGAAG GACTGCTGGA AAGCGAGCTG TTCGGCCATG TCCGCGGTGC CTTTACCGGC
GCAATCAAAG ACAAGATGGG CCGCTTCCAA AAGGCCCATG GTGGCACCAT CTTTCTGGAT
GAAATCGGCG ACATCTCCCC TTCCCTGCAG ATCCGCCTGC TGCGGGTATT GCAGGAGCGG
GAGATTGAAC GGGTCGGTGA CACAACACCG ATCAAGATTG ATGTACGGGT GATTGCCGCC
ACCCACCGCA ATCTACCGGA AAAAGTCCGT CGCGGTGAGT TTCGCCAGGA CCTCTACTAT
CGTCTTAATG TGGTACGTCT TGAAGTTCCT CCCCTGCGGG AACGGTTGGA AGACCTCCCC
CTGCTGGTTG AGCATTTCCT GCACAAATTT TCACACAAAT TCAACCGCAC CTTCAGCAGC
CTTTCCGAAG ATGTGTTGTC TGCGTTACGC AACCATTCCT GGCCCGGAAA CATCCGCGAG
CTGGAGCATC TGATCGAACA TGCCTGCATC TTAAGCCACA GCTCAATCAT CACCTCAGAT
GACCTGCCGA CTGAATTTTT CAACACGATT GGCCACCGGA CTGAAACCAG CCATGCCCAA
CAGCCCCATG CAACGGTTGA TCTGCAGGAG ACGTTGCGAC GCACACAGGG TAATCGTACT
GAAGCAGCAA AGCTGCTGGG CATCAGTCGA CGTACTTTTT ACCGTTGGCT TGAGCAACAA
ACAGAGCCAT GA
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| Protein sequence | MPGRILIVDD EIPVTRLIST VLGNDGHQTD VAHSCHDALT LIGQYPYDVI FIDIKLDRDQ
GGLALLKTAT AITPTSRVIM MTGYPDVATA TEAVRYGAFD YLCKPFDSLQ ISSITRHAIE
NRRLQLEREQ FRANLEAINR SISDAIIMVD QRLQLQHLND AALQCGYNPA QLGQPLDQLS
TGCLGSCRMA LAETVRTGQR HELKRIECRG TGNRTRIVSV IATPTTSEDG ARTGAVAVIR
DETRLDDLER QLQQRSRFHT IIGHAPVMQQ LYTRIEALAD VTSTVLICGE SGTGKELVAQ
ALHECGARKQ KPFIKLNCSA LPEGLLESEL FGHVRGAFTG AIKDKMGRFQ KAHGGTIFLD
EIGDISPSLQ IRLLRVLQER EIERVGDTTP IKIDVRVIAA THRNLPEKVR RGEFRQDLYY
RLNVVRLEVP PLRERLEDLP LLVEHFLHKF SHKFNRTFSS LSEDVLSALR NHSWPGNIRE
LEHLIEHACI LSHSSIITSD DLPTEFFNTI GHRTETSHAQ QPHATVDLQE TLRRTQGNRT
EAAKLLGISR RTFYRWLEQQ TEP
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