Gene Daro_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0477 
Symbol 
ID3570201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp537517 
End bp538848 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content67% 
IMG OID637678919 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_283704 
Protein GI71906117 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG ACCTGAAAAT CCTGATCATC GAAGACGACC CCGATGTGGC GCTCGGCTGC 
GAGCAGGCGC TGCAACTCGA AGGACTGGCC GCCGAATGCG CCGGCAGCGC CGAACTGGCA
CGCCACCGCC TGCATGCCGA CTTCCCCGGC ATCGTGATCA GCGATATCCG CCTGCCCGGC
CAGGATGGCC TGAGCCTGCA GCGCGAACTG CACGCCCTCG ACCCGGAATT GCCGGTGCTA
CTGATCACCG GCCACGGCGA TGTGTCGATG GCCGTACAGG CGATGAAGGA TGGCGCCTAC
GATTTCCTGC AAAAGCCCTT TGCCCCCGAG CAGCTCGTCG ACATCGCCCG CCGCGCGCTG
GAAAAGCGCC GGCTGGTCCT CGAAGTGCGC GCCCTGCGCC GCCAGCTCGA CCAGCGCAAT
CTGCTCGAAG CCCGCCTGAT CGGCAACTCG GCCGGCATGG CCCGCGTCCG TGGCCTGATC
GGCGCCCTGG CCAGCAGCGC GGCCGACGTG CTGATCCACG GTGAGACCGG CACTGGCAAG
GAACTGGTTG CCCGCTGCCT GCACGACGCC AGCCCGCGGG CCAAGGGTAA TTTCGTCGCC
ATCAACTGCG GCGGCCTGCC GGAAACGCTG TTCGAAAGTG AAATCTTCGG TCACGAGGCG
GGTGCCTACA CCGGTGCCGG CAAGCGGCGC ATCGGCAAGA TCGAGTACGC CAACGGCGGC
ACGCTGTTTC TCGACGAAAT CGAAACCATG CCGGTCCCGA TGCAGATCAA GTTGCTGCGT
GTGCTACAGG AGCGCACGTT GGAGCGGCTC GGGTCGAATA CGGCGATTCC CATCGACTGC
CGCATCATTG CCGCGACCAA GGAAGACCTG ACGGCATTGT CCGAGCAAGG AAAATTCCGT
GCCGACCTCT ACTACCGCCT GTCGGTCGCC AACCTGCCGC TGCCACCGCT GCGCGAGCGG
CGCGAGGACA TTCCGCTGCT CTTCGAACAC TTCCTGCTGC AAGCCGCCGC CCGCCACGAA
CGCGCCGTGC CTACGACATC CGCCGGCCGC ATGCAGCAAC TGGTCGGCTA CCACTGGCCG
GGCAACGTGC GCGAATTGCG CAACGTCGCC GACCGCTGCG TGCTCGGCAT CGAAGCCGGC
TCGCCGCCTT TCGGCCAGCC CGCCGGCGAT GCGCCGCGCC CGCTGGCCGA GACCGTCGAC
GCCTTCGAAC GCGCCCTGAT CGCCGACGCC CTGCGCCGCT ATGGCAGCCT GGCGCGCACC
GCCGAAGCCC TGCTCATCGC CAAGACAACA CTGCACGACA AGATTCGGAA ATACGGTTTG
CACGGCGAGT GA
 
Protein sequence
MTDDLKILII EDDPDVALGC EQALQLEGLA AECAGSAELA RHRLHADFPG IVISDIRLPG 
QDGLSLQREL HALDPELPVL LITGHGDVSM AVQAMKDGAY DFLQKPFAPE QLVDIARRAL
EKRRLVLEVR ALRRQLDQRN LLEARLIGNS AGMARVRGLI GALASSAADV LIHGETGTGK
ELVARCLHDA SPRAKGNFVA INCGGLPETL FESEIFGHEA GAYTGAGKRR IGKIEYANGG
TLFLDEIETM PVPMQIKLLR VLQERTLERL GSNTAIPIDC RIIAATKEDL TALSEQGKFR
ADLYYRLSVA NLPLPPLRER REDIPLLFEH FLLQAAARHE RAVPTTSAGR MQQLVGYHWP
GNVRELRNVA DRCVLGIEAG SPPFGQPAGD APRPLAETVD AFERALIADA LRRYGSLART
AEALLIAKTT LHDKIRKYGL HGE