Gene Spea_3041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3041 
Symbol 
ID5663431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp3731040 
End bp3731651 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content47% 
IMG OID641237680 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001502893 
Protein GI157962859 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAACAAC AGCTCAATGG TCCAGTCTAT CTCGTCGATG ATGACGAAGC GATTATCGAC 
TCAATCAGTT TTCTAATGGA AGGTTTTGGC TATCAACTCC GCAGCTTTAA CAGTGGCGAT 
CGTTTCTTGA AAGAGGTCGA CTTAACCCTA GCTGGATGCG TAATTTTAGA TGCACGAATG 
CCGGGGCTGA CTGGTCCTCA GGTGCAGCAG CTGCTAAGCG ATGCTAACAG CCCATTGGCG 
GTGATTTTCT TAACTGGCCA TGGCGATGTA CCTATGGCTG TGGATGCTTT TAAGAATGGC 
GCTTTTGACT TCTTCCAAAA GCCCGTTCAG GGGAGCATAC TGGCACAAGC TATTGCTAAA 
GGGCTAACCA ACAGTCTTGA ACAGCACCTG AAACTCACAG ACCAAGCCTT AATCGATACC 
TTGTCGGAGC GGGAAGCCCA GATTTTCCAA TTAGTCATTG CTGGCAATAC CAATAAGCAG 
ATGGCAAATG AGCTTTGTGT TGCGATTCGT ACTATCGAAG TTCATCGCTC AAAACTGATG 
ACTAAGCTCG GAGTGAGCAA CCTGGCTGAG TTAGTCAAAC TCGCGCCATT GTTAGCAGAG 
AAGAACGGAT AA
 
Protein sequence
MQQQLNGPVY LVDDDEAIID SISFLMEGFG YQLRSFNSGD RFLKEVDLTL AGCVILDARM 
PGLTGPQVQQ LLSDANSPLA VIFLTGHGDV PMAVDAFKNG AFDFFQKPVQ GSILAQAIAK 
GLTNSLEQHL KLTDQALIDT LSEREAQIFQ LVIAGNTNKQ MANELCVAIR TIEVHRSKLM 
TKLGVSNLAE LVKLAPLLAE KNG