Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2563 |
Symbol | |
ID | 3738867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 2909886 |
End bp | 2911328 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637779849 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_385507 |
Protein GI | 78223760 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00247378 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTATTGC ACCGCATACT CGTAGCCGAC GACGAAGAAA GCATGCGCTG GGTCCTCTCC AAGGCCCTGC GGAAAAAGGG ATTTTCCGTG GATCTCGCCC GGGACGGCGA AGAGGCCCTG CGCCTCATCC AGTCCGGCGA CTATGATCTG GCGATCCTTG ACATCAAGAT GCCCGGCATT TCGGGGCTCG ACCTCCTGGA CCGGGTGAAG GAGCTGAAGA GCGACCTCCT CATGGTGATC ATGACCGCCG AGGCAAGCAT GAAGAACGCC GTGGAGGCCA TGAAGCGCGG CGCCTACGAC TACATCACCA AGCCCTTCGA CCTGGACGTG ATCGACGCCA TCATCGAGAA GGTGAACCGG GCCAGGGAGA TCACCTCCCA GATGTCGATC CTCCGGGAGG AACTGAAGGA CCGCTATCTC CTGGAGAAGA ACATCGTCGG TAACTCCCCG GCCATGCGGG AGGTCTACAA GACCATCGGC AAGGTGGCTC CCAGCGACGT AACGGTGCTG GTGCAGGGGG AGTCGGGGAC CGGCAAGGAG CTCATCGCCC GGGCCATCCA TTTCAACTCC AAACGGATCG GCAAGCCGTT CATTGCCCTC AACTGCGCAG CGATCCCCAA GGAACTCCTG GAGAGCGAGC TCTTCGGCTT CGAGAAGGGG GCCTTCACCG GCGCCGCGGA GCGCAAACTC GGCAAGTTCG AGCAGGCCAA CGGCGGCACT ATCTTCCTGG ACGAGATCGG CGACATGCCC CTGGACCTCC AGGCGAAGAT CCTGCGGGTC CTCCAGGAGA AGGAGGTGAC CCGCACCGGT GGGAGCCAGA ACATCGCCGT GGACGTGCGG ATCGTGGCGG CCACCAACCA GAACCTGGAG GAACTGGCCC GGAACAAACA GTTCCGGGAA GACCTCTACT ACCGCCTGAA CGTGGTGCCC ATCCAGCTGG TGCCGCTGCG GGAGCGCAAG GAGGACATCC CGGCCCTGGT GGAGTACTTC CTCCACAAGA CCTGTGCCGA ACTGGAGGTC CCCGGCAGGA CCTGCTCCCC CGAGACCATG GCGCTCCTCA CCGCCTACTC CTGGCCCGGC AACGTGCGGG AGCTGGAGAA CACCATCAAA AGGGCCGTGA TCCTCTCCTC CGACCCGCTC CTCACGCCGG CAGACTTTCC GGGGCTCCGC ATCCAGCGCA CCGGCGAGGC CGTCGCCACC GACGAGCTGT CGCTTGAGGC CCTGGTGGAC ATGAAGCTGC GGGCGAGCCT CACCAATCTC GACAAGATGG AGACCGGCGA CATCTACAAC CTGGTCCTCA AACAGATCGA ACGCCCCCTC ATCCGCTTCG TCCTGGAAAA GACCCGGGGG AACCAAGTGA AGGGCGCCGA AATCCTCGGC ATCAACCGGA ACACACTCCG GAAGAAGATC CAGGAACTGG GCATCGAAAT CAGGAGAGAC TGA
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Protein sequence | MLLHRILVAD DEESMRWVLS KALRKKGFSV DLARDGEEAL RLIQSGDYDL AILDIKMPGI SGLDLLDRVK ELKSDLLMVI MTAEASMKNA VEAMKRGAYD YITKPFDLDV IDAIIEKVNR AREITSQMSI LREELKDRYL LEKNIVGNSP AMREVYKTIG KVAPSDVTVL VQGESGTGKE LIARAIHFNS KRIGKPFIAL NCAAIPKELL ESELFGFEKG AFTGAAERKL GKFEQANGGT IFLDEIGDMP LDLQAKILRV LQEKEVTRTG GSQNIAVDVR IVAATNQNLE ELARNKQFRE DLYYRLNVVP IQLVPLRERK EDIPALVEYF LHKTCAELEV PGRTCSPETM ALLTAYSWPG NVRELENTIK RAVILSSDPL LTPADFPGLR IQRTGEAVAT DELSLEALVD MKLRASLTNL DKMETGDIYN LVLKQIERPL IRFVLEKTRG NQVKGAEILG INRNTLRKKI QELGIEIRRD
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