Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2223 |
Symbol | |
ID | 5192047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2529978 |
End bp | 2530610 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640586680 |
Product | response regulator receiver protein |
Protein accession | YP_001267546 |
Protein GI | 148547444 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTGCAAG CAAAAGTGTA TGTGGTCGAT GACGACCAGG GTATGCGCGA CTCTACGGTC TGGCTGCTGC AGTCGGTGGG CCTGCAAGCC TTGCCATTCG CCAGCGGGCA GGCGTTTCTC GATGCCTGCG TCGATGATGG GCCCGCGTGT GTGCTGTTGG ATGTGCGCAT GCCGGGGCTG GGCGGGTTGG CTGTGCAGCA GGCGATGCGC GAGCGTGGCC TGATGGTGCC GGTGATCTTC GTCAGCGGTC ATGCCGATGT ACCGATCGTG GTGCGGGCGT TCAAGGCCGG CGCCTGCGAC TTCATCGAAA AACCCTACAA CGACCAGTTG CTGCTCGACA GCGTTCAGGC TGCGCTGGAG CACGCCGGGC TGGCGCGACA GGGCGATCAG GCGCTGGCCT TGGTGCAGGC GCGCATCGAC GGCCTGACGC CGCGTGAGCG AGACGTCTTC GTACCGTTGG CCCAAGGGTT GAACAACCGC GAGATTGCCG AGCAGTTGGG CATCAGCGTC AAGACCGTGG ACCTGTACCG AGGCCGGGTG ATGAAGCGGT TGCAGGCAGG CAGCCTCGCA GAGCTGGTGG GGATGGCGAT TGCTTGCGGG GCGGTGGAGG CGCTGGGCCT GCGAGCGCGG TAG
|
Protein sequence | MLQAKVYVVD DDQGMRDSTV WLLQSVGLQA LPFASGQAFL DACVDDGPAC VLLDVRMPGL GGLAVQQAMR ERGLMVPVIF VSGHADVPIV VRAFKAGACD FIEKPYNDQL LLDSVQAALE HAGLARQGDQ ALALVQARID GLTPRERDVF VPLAQGLNNR EIAEQLGISV KTVDLYRGRV MKRLQAGSLA ELVGMAIACG AVEALGLRAR
|
| |