Gene Pput_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2223 
Symbol 
ID5192047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2529978 
End bp2530610 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID640586680 
Productresponse regulator receiver protein 
Protein accessionYP_001267546 
Protein GI148547444 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGCAAG CAAAAGTGTA TGTGGTCGAT GACGACCAGG GTATGCGCGA CTCTACGGTC 
TGGCTGCTGC AGTCGGTGGG CCTGCAAGCC TTGCCATTCG CCAGCGGGCA GGCGTTTCTC
GATGCCTGCG TCGATGATGG GCCCGCGTGT GTGCTGTTGG ATGTGCGCAT GCCGGGGCTG
GGCGGGTTGG CTGTGCAGCA GGCGATGCGC GAGCGTGGCC TGATGGTGCC GGTGATCTTC
GTCAGCGGTC ATGCCGATGT ACCGATCGTG GTGCGGGCGT TCAAGGCCGG CGCCTGCGAC
TTCATCGAAA AACCCTACAA CGACCAGTTG CTGCTCGACA GCGTTCAGGC TGCGCTGGAG
CACGCCGGGC TGGCGCGACA GGGCGATCAG GCGCTGGCCT TGGTGCAGGC GCGCATCGAC
GGCCTGACGC CGCGTGAGCG AGACGTCTTC GTACCGTTGG CCCAAGGGTT GAACAACCGC
GAGATTGCCG AGCAGTTGGG CATCAGCGTC AAGACCGTGG ACCTGTACCG AGGCCGGGTG
ATGAAGCGGT TGCAGGCAGG CAGCCTCGCA GAGCTGGTGG GGATGGCGAT TGCTTGCGGG
GCGGTGGAGG CGCTGGGCCT GCGAGCGCGG TAG
 
Protein sequence
MLQAKVYVVD DDQGMRDSTV WLLQSVGLQA LPFASGQAFL DACVDDGPAC VLLDVRMPGL 
GGLAVQQAMR ERGLMVPVIF VSGHADVPIV VRAFKAGACD FIEKPYNDQL LLDSVQAALE
HAGLARQGDQ ALALVQARID GLTPRERDVF VPLAQGLNNR EIAEQLGISV KTVDLYRGRV
MKRLQAGSLA ELVGMAIACG AVEALGLRAR