Gene Gbem_3097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3097 
Symbol 
ID6779956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3583878 
End bp3585254 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content61% 
IMG OID642769094 
Productdiguanylate cyclase 
Protein accessionYP_002139895 
Protein GI197119468 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.948135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGGA TTCTTTTAGT CGAAGACGAC AGCTTCTTCA GAGAGATCTT CACAGACCTT 
CTCAAAGAAG ATGGCTACAG CGTCGAGGTG GCCGTCTCCG GTGAAGAGGC ATTGGAGATG
ATCGGAAAGG GCGGGTATCA CCTGGTTGTC ACCGACCTGG TGATGCGCGA CGTCAGCGGA
CTGGACATCC TATCGACGGT AAAGAGGCTG GACCCTGCCA CGGCGGTCAT CATGGTGACC
GGGCACGCCA ATGTGGAAAC CGCCATATAC GCGCTGAAAA ACGGGGCAAC CGACTACCTC
ATCAAGCCCA TCAACCACGA CGAATTCCGG CATATCGTCG CGCACTGCCT GGAGCAGCGC
AGGCTCCTGG ACGAGAACCT TGAGCTGAAG GGGCTGGTCA ACCTGTTCCA GGTAAGCCAG
AACATAGCCA ACTGCCTGGA ACTGGAGCGC ATCTATCCTC TTTTGATGGA GGCGCTGTCC
AAGGAGATCG GCGCCAACCG GGGGTTGGGC TACTTCAGCG AGGGTGGGCA GCTGGTGCTG
CACGAAATGA AGGGGATCGA CGAGCAGAGC GCTCCCCTGC TGGGTCAGGC GGTGATCGCC
GAGTGCGACC TGCATGACGA CGGCGTCAGC AACCTGGTCA TGCTCAGGGA TTTTCTTCCG
GAAGGGGCGG GATTCGGCGA GATAAGGGAG GCGATCTGCC TCTACATCCG CCAGAAAAGC
ACGCTGGAAG GGGTCATCAT CCTGGTCAAC GACCCCGACT CCACGCTCCC CAGGGAGGTG
AACCGCAAGC ACGTCACCTT CCTCCTCGAT CAAGCCTCGC TGGCTCTCGA CAACGCCGCA
CGTTACAACT TCGCCAAGGA CCTGCTCTAC ATCGACGAGT TGACCGGCCT TTACAACTAC
CGCTACCTCG ACGTGGTGCT GGAGCGGGAG CTGAAGCGCT CGGAGCGCTA CGGTTCCAAC
CTCTCCGTGC TCTTTCTGGA CATCGACCTC TTCAAGTCGG TGAACGACAC CTTCGGGCAC
CTGATCGGCA GCCGGGTGCT GCGGGAGATC GGCAGCCTGC TCAGAAAGAG CGTCCGCGAC
GTGGATGCCG TGATCCGCTA CGGCGGCGAC GAGTACACCA TCGTGCTGGT CGAGACCGGC
CTGGACGGCG CGGCGATAGT CGCCGAGCGT ATCAGGAAGA TGGTTGAGGC ACATACATTC
TCCAAGGCCG ACGGGCTCTC CATCAAGCTC ACCGTCAGCC TCGGCTACGC CTGCTCCCCG
GACGACGCCT CCACGAAGAC GGAACTCCTC GAGATGGCGG ATCAGGCGAT GTACCGCGGC
AAGGCCGCCG GCAAGAACAA GGCCTTCCAC GCCCAGCGGC TGACCACCCC TCCCTGA
 
Protein sequence
MERILLVEDD SFFREIFTDL LKEDGYSVEV AVSGEEALEM IGKGGYHLVV TDLVMRDVSG 
LDILSTVKRL DPATAVIMVT GHANVETAIY ALKNGATDYL IKPINHDEFR HIVAHCLEQR
RLLDENLELK GLVNLFQVSQ NIANCLELER IYPLLMEALS KEIGANRGLG YFSEGGQLVL
HEMKGIDEQS APLLGQAVIA ECDLHDDGVS NLVMLRDFLP EGAGFGEIRE AICLYIRQKS
TLEGVIILVN DPDSTLPREV NRKHVTFLLD QASLALDNAA RYNFAKDLLY IDELTGLYNY
RYLDVVLERE LKRSERYGSN LSVLFLDIDL FKSVNDTFGH LIGSRVLREI GSLLRKSVRD
VDAVIRYGGD EYTIVLVETG LDGAAIVAER IRKMVEAHTF SKADGLSIKL TVSLGYACSP
DDASTKTELL EMADQAMYRG KAAGKNKAFH AQRLTTPP