Gene M446_6109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6109 
Symbol 
ID6134949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6716078 
End bp6716710 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content75% 
IMG OID641646207 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001772819 
Protein GI170744164 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0504113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCTG ATCCGGCGGT GCACGTCGTC GACGACGACG ACGCGATGCG CGACTCGGTC 
GGGTTCCTGC TCGACACGGC GGGTTACACC GCGCGCCTCT ACGAGGCGGC CGAGCCGCTG
CTCGACGCCC TGCCGGGCCT CGCGGAGGGC TGCATCCTCA CCGACATCCG CATGCCCGGG
ATCGACGGGA TCGAGTTCCT GCGCCGGGTG CGGGCGGCCG GCAGCCCGCT CCCGGTCATC
GTCATGACCG GCCACGGCGA CGTGCCCCTC GCGGTCGAGG CGATGAAGCT CGGCGCCAGC
GACTTCATCG AGAAGCCCTT CGACGACGAG ACGCTGCTGC GCGCGGTGCG CGGCGCCCTC
GCCCGCCCGG CCCCCGCGAC CGCCCCGCTC CCCGGGGCCG ACCCGGCCGA CCCGGCGCTG
CGGGACTTCA CCCGCCGGGT CGAGACCCTG AGCGGGCGCG AGCGGCAGGT GCTCACCCAC
CTCGTGGCCG GCGGCACCGC CAAGGAGATC GGCCGGGCGC TCGCCATCAG CCCGCGCACC
GTGGAAATCT ACCGGGCCAA GGTGATGGCC AAGACCCAGG CCACCTCCCT CTCCGAACTC
GTGCGCTGGG CCGTGCGGGC GGGCCTCGCC TGA
 
Protein sequence
MAADPAVHVV DDDDAMRDSV GFLLDTAGYT ARLYEAAEPL LDALPGLAEG CILTDIRMPG 
IDGIEFLRRV RAAGSPLPVI VMTGHGDVPL AVEAMKLGAS DFIEKPFDDE TLLRAVRGAL
ARPAPATAPL PGADPADPAL RDFTRRVETL SGRERQVLTH LVAGGTAKEI GRALAISPRT
VEIYRAKVMA KTQATSLSEL VRWAVRAGLA