Gene Rmar_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1797 
Symbol 
ID8568449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2105095 
End bp2106480 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content66% 
IMG OID 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003291069 
Protein GI268317350 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.774224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCAA CCATCCTGGT CGTCGACGAC GAGCGCAGCA TCCGGCGCAC GCTTCGCGAG 
ATCCTGGAAT ATGAGGGATA CGCCGTCGAG GAGGCCGCCG ACGGCGACGA AGCGCTGGAA
AAACTTCGCG AAGGGCGCTA CGATCTGGTG CTGCTCGACA TCAAAATGCC GCGGCGCGAC
GGCATGGAGG TGCTCCGTAC GCTGGCGGCC GAGCAGCCCG AGTTGCCCGT CGTGATGATC
TCAGGACACG GCACCATCGA GACGGCCGTC GAGGCCACCC GCCTGGGTGC CTTCGACTTT
ATCGAGAAGC CGCCGGATCT GAACCGCCTG CTGCTGACCG TCCGCAACGC GCTGGAGCGC
GGCCAGCTCC AGACCGAAAA CCGGCGCATC CGGCAGGTCC TGACCGAGCG CTGGGAGGGC
GAGCTGACGC CCATCCTGGG GGAGAGTCCC GCCATCAAGC GCGTGATCGA GACGATCCAT
CGCGTGGCGC CCACCGAGGC CCGCGTGCTC ATCACCGGCG AGCCCGGTAC GGGCAAAGAA
CTGGTGGCCC GCTGGATTCA TCACCTCTCC GGCCGTAAAG ATGGCCCCAT GGTGGAGGTC
AACTGCGCGG CCATTCCGAG CGAACTGATC GAAAGCGAGC TGTTCGGGCA CGAAAAGGGC
GCCTTCACCG GTGCCACCCG ACTTCGCATC GGCAAGTTCG AGCAGGCGCA CAGCGGCACG
CTCTTTCTCG ACGAGATCGG CGACATGAGC CTGGCCGCGC AGGCCAAGGT GCTCCGGGCG
CTGCAGGAGA ACCGGATCCA GCGTGTGGGC GGCGAGCGCT CCATCTCGGT CGATGTGCGC
GTGGTGGCCG CCACGAACAA AGACCTCTGG AAGCTCGTCG AGGAAGGCAA ATTCCGCGAA
GACCTCTATC ACCGGCTGAG CGTCATCCTC ATCGAGGTGC CGCCGCTCCG GGAGCGGCGC
GAGGACATCC CAATCATCGC ACAGTACGCG CTGGAACGGC TGGCCCGCCG CAACGGCATG
CCGCCGAAGG AATTCGAGCC GGCCGCGCTG GAGCAACTCA AGCGCTACGA GTGGCGGGGC
AACGTGCGCG AGCTGTACAA CGTGGTCGAG CGCCTGCTCA TCCTGAGCGA CGGCCCCACC
ATCACGGCCC GCGACGTGCA GCGCTACGTG CATCCCGGAA GCACCTCGGG ATCGGGGTCA
CTGCAGGAGC TGATCGAGCG CTACCCCACG TTCGCCGAAT TCCGGGACGC GGCCGAGAAG
CTGTTTCTGG AGCACAAGCT CCGGGAATTC GGCTGGAACG TCAGCAAGAC GGCCGAGGCC
ATCGGCATTC AGCGCTCGCA CCTGTACAAC AAGCTCGCCA AGTACGGCAT CCAGCGCGAA
GCGTAA
 
Protein sequence
MAATILVVDD ERSIRRTLRE ILEYEGYAVE EAADGDEALE KLREGRYDLV LLDIKMPRRD 
GMEVLRTLAA EQPELPVVMI SGHGTIETAV EATRLGAFDF IEKPPDLNRL LLTVRNALER
GQLQTENRRI RQVLTERWEG ELTPILGESP AIKRVIETIH RVAPTEARVL ITGEPGTGKE
LVARWIHHLS GRKDGPMVEV NCAAIPSELI ESELFGHEKG AFTGATRLRI GKFEQAHSGT
LFLDEIGDMS LAAQAKVLRA LQENRIQRVG GERSISVDVR VVAATNKDLW KLVEEGKFRE
DLYHRLSVIL IEVPPLRERR EDIPIIAQYA LERLARRNGM PPKEFEPAAL EQLKRYEWRG
NVRELYNVVE RLLILSDGPT ITARDVQRYV HPGSTSGSGS LQELIERYPT FAEFRDAAEK
LFLEHKLREF GWNVSKTAEA IGIQRSHLYN KLAKYGIQRE A