Gene Daro_2491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2491 
Symbol 
ID3568040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2689731 
End bp2690366 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID637680958 
ProductLuxR response regulator receiver 
Protein accessionYP_285695 
Protein GI71908108 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0000000456787 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGC CCGACCTGTT ACCCGTCATC CATGTCGTCG ACGACGAAGC CCCCTTCCGC 
CGCTCGCTGC TCTTTTTGCT CGAATCCGTC GGTTGGCAAG CCGTCGGGCA CGATTCCGCC
GAAGCCTTCC TGCTGGCGGC ACCGGAGATG CAGGCCGGCG GCGGATGCCT GGTGCTCGAC
ATTCGCATGC CACGCATTAG CGGCCTTGAA TTGCAACGTC GCCTGCGTGC CGCTGATTCG
CCCTTTCCAA TTGTTTTCAT GACCGGCCAC GGCGAAGTTG AACTAGCGGT ACAGGCGATG
AAAAACGGTG CTGTCGACTT CCTGCAAAAG CCCTTCAAGG ACCAGATCTT TCTCGATACC
GTGGAGCGGG CGGTACAACT CAGTCTCGAA CGCCACGCCG CCAACCGCCG TCACCAGGAA
GCACGCGAAG TTCTCGACCG ACTCTCGGTT CGCGAGCGCG AAGTCGCCCG CCTGCTCGCC
CTCGGCCTGG CCAACAAGGA AGTGGCACGT CAACTGGGCA TCAGCGACAA TACGGTGCAC
GTCCATCGCC AACACGTCAT GGAAAAAACA TCTACCGGTA GTGCCGCCGA ACTGGCCCGC
CTGATCCTGC GCGCTGACCC GAACGGCCTC GACTAA
 
Protein sequence
MTLPDLLPVI HVVDDEAPFR RSLLFLLESV GWQAVGHDSA EAFLLAAPEM QAGGGCLVLD 
IRMPRISGLE LQRRLRAADS PFPIVFMTGH GEVELAVQAM KNGAVDFLQK PFKDQIFLDT
VERAVQLSLE RHAANRRHQE AREVLDRLSV REREVARLLA LGLANKEVAR QLGISDNTVH
VHRQHVMEKT STGSAAELAR LILRADPNGL D