| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0645 |
|---|
| Symbol | |
|---|
| ID | 6242144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 728276 |
|---|
| End bp | 728998 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642592410 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001856881 |
|---|
| Protein GI | 186475411 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGT CTGCGCCGCT CGTCTACGTC GTCGACGACG ACCCGTCGGT GCGCCGCGCG
CTCACGCGGC TTATCAGGTC GGCGGGCCAC GAGGTCGAGG CTTATGGTTC GGCCCGCGAA
TTTCTCGCGC ATTGGGGCGT CGAGCGGACG CCGGCGTGCG TGGTGCTCGA CGTACAGTTG
CCAGACCTGA GCGGGCTCGA ACTGCAGCGT GAACTCGATG CCCGCTTGCC CATCATTTTT
CTGACGGGAC ACGGCGACAT CGCGATGACG GTCGGCGCGA TCAAGGCCGG CGCGACCGAT
TTCCTCACCA AGCCCGTGCG CGACGACGAT CTGCTGCACG CTATCGATCA CGCGCTCATG
CGTTCCGCCG AAGTGTCGAA GTCGATGCAC GAACTTGAAG AATTGCGCAG CCGCGTCGGA
CGCCTGACGG TGCGAGAGCG CGAAGTGATG AACCTGATCG TGCTCGGCCG TTTGAACAAG
CAGGTGGCGT GCGAGCTGGG CACTGTCGAA AAAACCGTCA AGGCACATCG CGCGCGCGTG
ATGCAGAAGA TGGAGGTCGG CTCGCTCGCC GAACTGGTGC GCATCGCCGA CAAGGTAGCC
GTTGCGAGCA ACGCGCACCG TGCCGTCGAA CCGCAAGCGG ACGCTTCCGG CGCCGCGTGC
GAGCCCACAG CCAAGCGGAT ACGAGACCAA GGTCCAATAC CACCGACGCC CGCAGTCTCA
TAG
|
|---|
| Protein sequence | MNPSAPLVYV VDDDPSVRRA LTRLIRSAGH EVEAYGSARE FLAHWGVERT PACVVLDVQL
PDLSGLELQR ELDARLPIIF LTGHGDIAMT VGAIKAGATD FLTKPVRDDD LLHAIDHALM
RSAEVSKSMH ELEELRSRVG RLTVREREVM NLIVLGRLNK QVACELGTVE KTVKAHRARV
MQKMEVGSLA ELVRIADKVA VASNAHRAVE PQADASGAAC EPTAKRIRDQ GPIPPTPAVS
|
|---|
| |