Gene Rfer_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1135 
Symbol 
ID3963441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp1220460 
End bp1221065 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content54% 
IMG OID637915956 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_522407 
Protein GI89899936 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.564331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAGG AAACTGTGTT CATAGTCGAT GATGATGCAT CGATTCGAGA TTCGTTATCA 
CTCTTGTTGA GTCTGCGCGG ATTTGCAACT GCGCTGTTTG CCAATGCCGA GGACTTTTTG 
GCGGCGCTTC AGCCCGATTG GCGAGGCTGT GTGGTGGTTG ACATCCGAAT GCCCGGCATG 
TCGGGGCTAG AGCTTCAAAG GTGTCTGCGA GAGCGCGGTC CGAGTTTGCC AGTCATTGTC 
ATAACAGCGC ACGGAGACGT CGCCGCGGCC CGACAGGCGT TTCTGGCAGA TGCCGTGGAC 
TTTATTGAAA AACCTTTTGA CGGCAAGCAA CTTCTGGGTG CGATCGAGAA CGCCCTGTCG 
GGCTTTCGCG CCCTTGACAC TGCACAGGCT AGAGCTGCTT TCACCAAACC AACGCTTGGG 
CAACTCTCGA TACGCGAGCG TGAAGTGATG ACATTGATGG TTAAGGGTCT TCACAACCGT 
CGCATCGCTG AGACGCTTGG TATCAGTCCC AGAACTGTTG AGGTCCACAA GGCACGGGTG 
ATGGAAAAAC TCGGCGCGCA AAACATTGTC GATCTGGTGC GATTGGTTGA TAAGGGCTTG 
ACCTGA
 
Protein sequence
MHKETVFIVD DDASIRDSLS LLLSLRGFAT ALFANAEDFL AALQPDWRGC VVVDIRMPGM 
SGLELQRCLR ERGPSLPVIV ITAHGDVAAA RQAFLADAVD FIEKPFDGKQ LLGAIENALS 
GFRALDTAQA RAAFTKPTLG QLSIREREVM TLMVKGLHNR RIAETLGISP RTVEVHKARV 
MEKLGAQNIV DLVRLVDKGL T