| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3079 |
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| Symbol | |
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| ID | 4573984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 3367926 |
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| End bp | 3369368 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639757136 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_902732 |
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| Protein GI | 118581482 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00177638 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTTA CCAGAATCCT GGTGGCCGAC GACGAAGAGA GCATGCGCTG GGTTCTTTCC
AAGGCCCTGA AGAGGAAGGG CTTCACCGTC GACCTTGCCG ACGACGGCCG ACAGGCCCTG
GCGCTGATCC AGGAGAACAG CTACGACCTG GCCATCCTGG ACATCAAGAT GCCCGGCATG
AGCGGCCTCG ATCTGCTGGA CCGCATCCGC GAGATGAAGA GCGACCTGCT GGTGGTGATC
ATGACCGCCG AGGCCAGCAT GAAGAACGCC GTGGAGGCCA TGAAGCGCGG TGCCTACGAC
TACATCACCA AGCCCTTCGA CCTGGACGTC ATCGACGCCA TCGTGGAAAA GGTCGGGCGG
GCGCGGGAGA TAGCCGGCCA GGTGTCCCTG CTCAAGCAGG AGCTGAAGGA ACACTACCAG
GTGGAGAAGA ACATCATCGG CAACTCGGCC GCCATGCAGA GTATCTACAA GACCATTGGC
AAAGTGGCTG ACAGCGACAT TACCATCCTG ATCCAGGGAG AGTCGGGCAC CGGCAAGGAG
ATGGTGGCCC GGGCCATACA TTTCAACTCA GGCCGACTGG GCAAGCCATT CGTGGCCATC
AACTGCGCCG CCATTCCCCG CGACCTCCTG GAGAGCGAGC TGTTCGGCTC GGAGAGGGGT
GCCTTCACCG GGGCCAGCGA GCGCAAGCAG GGCAAATTCG AGCAGGCCAA CCAGGGGACG
ATCTTCTTGG ACGAGATCGG CGACATGCCG CTGGACCTGC AGGCCAAGAT CCTGCGCGTG
CTCCAGGAGC ACGAGGTTAC CCGGGTGGGC GGAACCCAGA GCATAGCGGT GAACGTGCGC
ATCGTTGCCG CCACCAATCA GGAGTTGCAG GAGCGGGTCC GCCAGCGGGA GTTCCGCGAG
GACCTGTACT ACCGCCTGAA CGTGGTCCCC ATCACCCTGG CCCCTTTGCG GGAGCGGCGC
GACGACATCC CGGAGCTGGT GCGCTACTTT CTGGACCGGA CCTGCACGGA GCTCTCCATA
CCGCCCAAGC AGCTCACCCC CGAAGCTATG GCCCTGCTGT CCAGGCATTC CTGGCCAGGC
AACGTGCGTG AGCTGGAGAA CACCATCAAG CGCGCCGTGA TCCTCTCCAA CGACCCCATG
CTGACCGAGG CCGATTTCGA CGGCCTGCAA CCGGAGGGGG AGGAGACGGC AATGACTCCA
CAGGATGCCT CGCTGGAGGC CATAGTGGAG GCAAAGCTGA GGAGTTGCCT GACTGGCATC
GAAAAGCTGG ACAAGAGCGA CATCCACGCC AAGGTGCTGC AGCAGGTGGA ACGCCCCCTG
ATCCGCTTTA TCCTGGAAAA GACGCGCTGG AACCAGGTCA AGGCGGCCGA CATCCTGGGC
ATCAACCGCA ACACCCTGCG CAAGAAGATC CACGATCTGG AGATAGAACT GAAACGGGGC
TGA
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| Protein sequence | MTLTRILVAD DEESMRWVLS KALKRKGFTV DLADDGRQAL ALIQENSYDL AILDIKMPGM
SGLDLLDRIR EMKSDLLVVI MTAEASMKNA VEAMKRGAYD YITKPFDLDV IDAIVEKVGR
AREIAGQVSL LKQELKEHYQ VEKNIIGNSA AMQSIYKTIG KVADSDITIL IQGESGTGKE
MVARAIHFNS GRLGKPFVAI NCAAIPRDLL ESELFGSERG AFTGASERKQ GKFEQANQGT
IFLDEIGDMP LDLQAKILRV LQEHEVTRVG GTQSIAVNVR IVAATNQELQ ERVRQREFRE
DLYYRLNVVP ITLAPLRERR DDIPELVRYF LDRTCTELSI PPKQLTPEAM ALLSRHSWPG
NVRELENTIK RAVILSNDPM LTEADFDGLQ PEGEETAMTP QDASLEAIVE AKLRSCLTGI
EKLDKSDIHA KVLQQVERPL IRFILEKTRW NQVKAADILG INRNTLRKKI HDLEIELKRG
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