Gene Tmz1t_3866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3866 
Symbol 
ID7874107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp4261432 
End bp4262106 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content63% 
IMG OID643700808 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002890831 
Protein GI237654517 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATGG AAGCAGAGAA ACCGGACATG TCCGCAGCAC CCACGATATT CGTCATCGAT 
GACGATGAGG ACGTCCGTAC CAGTCTGTCA CGGCTGCTGC GCGCCGCCGG CTGGCAAGTC 
GAGACCTTCG CTTCGGCAGG CGACTTCCTC GAGCGCCCCG CCTGCGCCGG TACAGCTTGT 
GTATTGCTCG ATGTCGACAT GCCGGAAATG ACAGGTCCGC GCTTGCACGA AACGATGCTC 
GCACGCGGCA TCGACATGCC GGTCATCTTC CTCACCGGAA AGGGAGACGT GCCCACGACC 
GTCCAGGCAA TGAAGCGCGG CGCCGTCGAT TTCCTGCTCA AGCCGGTGGA AAACGATACG 
CTCTTTGCCG CCATCGAGAT CGCCCTGCGA CGTCACGACA GCGATCAGGC GCGCCGACGG 
GAACAACTCG GCATCGCCAT GCGCCTGGAT CGCCTCTCGG CCCGCGAGCG CGAAGTCATG 
GAACTGGTCG TTCTGGGCCG CCTCAACAAG CAGATTGCAG CGGAACTGGG CATCGCCGAA 
AAGACCGTCA AGATTCACCG CGGGCGAGTC ATGGAAAAAA TGGAGGTCCA ATCCGTGGCT 
GCACTGGTCC ACCTGTTGGA CCGCGCCGAC GACAGAGCGC CAGCCGGTGG CGGCGACCCG 
CCCCTCCAGC GCTAG
 
Protein sequence
MIMEAEKPDM SAAPTIFVID DDEDVRTSLS RLLRAAGWQV ETFASAGDFL ERPACAGTAC 
VLLDVDMPEM TGPRLHETML ARGIDMPVIF LTGKGDVPTT VQAMKRGAVD FLLKPVENDT 
LFAAIEIALR RHDSDQARRR EQLGIAMRLD RLSAREREVM ELVVLGRLNK QIAAELGIAE 
KTVKIHRGRV MEKMEVQSVA ALVHLLDRAD DRAPAGGGDP PLQR